Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2213

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,620,974	+		Pf6N2E2_2212	0.32	+0.9
2,620,975	-		Pf6N2E2_2212	0.32	-1.2
2,621,028	+		Pf6N2E2_2212	0.38	-0.4
2,621,029	-		Pf6N2E2_2212	0.38	+0.8
2,621,029	-		Pf6N2E2_2212	0.38	-1.0
2,621,043	+		Pf6N2E2_2212	0.39	+0.4
2,621,044	-		Pf6N2E2_2212	0.39	+0.5
2,621,052	+		Pf6N2E2_2212	0.40	+0.4
2,621,052	+		Pf6N2E2_2212	0.40	-0.3
2,621,166	+		Pf6N2E2_2212	0.51	-0.1
2,621,166	+		Pf6N2E2_2212	0.51	+0.6
2,621,167	-		Pf6N2E2_2212	0.51	-0.1
2,621,167	-		Pf6N2E2_2212	0.51	-0.5
2,621,167	-		Pf6N2E2_2212	0.51	+0.6
2,621,167	-		Pf6N2E2_2212	0.51	-0.6
2,621,167	-		Pf6N2E2_2212	0.51	-0.2
2,621,526	+		Pf6N2E2_2212	0.86	-0.6
2,621,526	+		Pf6N2E2_2212	0.86	-1.8
2,621,526	+		Pf6N2E2_2212	0.86	-0.2
2,621,527	-		Pf6N2E2_2212	0.86	-0.2
2,621,527	-		Pf6N2E2_2212	0.86	-0.5
2,621,527	-		Pf6N2E2_2212	0.86	-0.7
2,621,527	-		Pf6N2E2_2212	0.86	-0.1
2,621,527	-		Pf6N2E2_2212	0.86	-0.9
2,621,527	-		Pf6N2E2_2212	0.86	+1.3
2,621,527	-		Pf6N2E2_2212	0.86	-0.2
2,621,527	-		Pf6N2E2_2212	0.86	+0.6
2,621,527	-		Pf6N2E2_2212	0.86	-0.4
2,621,530	+		Pf6N2E2_2212	0.87	+0.8
2,621,531	-		Pf6N2E2_2212	0.87	-2.8
2,621,531	-		Pf6N2E2_2212	0.87	-0.9
2,621,565	+				-3.2
2,621,565	+				+0.1
2,621,565	+				+0.3
2,621,566	-				-0.9
2,621,569	+				-1.1
2,621,569	+				-0.2
2,621,649	-				-1.3
2,621,683	+				-1.9
2,621,684	-				-0.4
2,621,692	-				-1.1
2,621,692	-				-0.4
2,621,692	-				-0.2
2,621,700	+				+1.6
2,621,700	+				+1.2
2,621,700	+				-1.1
2,621,701	-				-2.2
2,621,701	-				-0.3
2,621,717	+				-0.2
2,621,718	-				-3.2
2,621,718	-				+0.6
2,621,718	-				-0.2
2,621,718	-				-0.8
2,621,718	-				-2.0
2,621,718	-				-0.9
2,621,762	+				-0.7
2,621,763	-				-1.5
2,621,772	-				+1.4
2,621,792	+				-0.5
2,621,803	+				-3.9
2,621,803	+				-0.2
2,621,803	+				-3.0
2,621,803	+				+0.1
2,621,804	-				-2.5
2,621,804	-				-0.5
2,621,804	-				-0.6
2,621,857	+				-0.7
2,621,857	+				-1.6
2,621,868	+				+0.4
2,621,868	+				-1.5
2,621,868	+				-0.4
2,621,869	-				-1.8
2,621,875	-				+0.1
2,621,902	+				-1.0
2,621,903	-				-0.0
2,621,927	+				+0.1
2,621,928	-				-1.1
2,621,928	-				-1.2
2,621,928	-				+0.5
2,621,934	+				-0.8
2,622,367	+		Pf6N2E2_2213	0.45	-2.8
2,622,367	+		Pf6N2E2_2213	0.45	-2.9
2,622,367	+		Pf6N2E2_2213	0.45	-0.8
2,622,367	+		Pf6N2E2_2213	0.45	-0.2
2,622,368	-		Pf6N2E2_2213	0.45	-0.3
2,622,368	-		Pf6N2E2_2213	0.45	+0.1
2,622,368	-		Pf6N2E2_2213	0.45	-0.0
2,622,658	+		Pf6N2E2_2213	0.78	-1.2
2,622,659	-		Pf6N2E2_2213	0.78	+0.8
2,622,659	-		Pf6N2E2_2213	0.78	-1.2
2,622,659	-		Pf6N2E2_2213	0.78	-0.9
2,622,718	+		Pf6N2E2_2213	0.85	-0.4
2,622,718	+		Pf6N2E2_2213	0.85	-1.5
2,622,763	+				-1.3
2,622,764	-				-1.5
2,622,882	+				+0.2
2,622,883	-				-3.5
2,622,883	-				-2.3
2,622,982	+				+0.6
2,622,982	+				-3.1
2,623,103	+				-0.8
2,623,113	+				-1.1
2,623,113	+				-0.5
2,623,113	+				-0.1
2,623,113	+				-2.0
2,623,113	+				+0.2
2,623,113	+				-0.5
2,623,113	+				-0.7
2,623,113	+				-1.2
2,623,114	-				-0.1
2,623,114	-				-0.2
2,623,192	-				-0.2
2,623,192	-				-0.2
2,623,192	-				-1.2
2,623,192	-				-0.2
2,623,192	-				+0.1
2,623,192	-				-0.9
2,623,222	+				-1.5
2,623,223	-				+0.3
2,623,313	-				+0.8