Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2182

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,586,472	-				-0.2
2,586,472	-		Pf6N2E2_2181	0.24	-0.6
2,586,477	+		Pf6N2E2_2181	0.25	-0.8
2,586,850	-		Pf6N2E2_2181	0.61	-0.2
2,587,285	-				-0.4
2,587,285	-				-0.2
2,587,289	-				+0.3
2,587,289	-				+0.1
2,587,289	-				+0.8
2,587,329	-				+0.2
2,587,329	-				-4.0
2,587,357	-				-0.0
2,587,434	+				+1.5
2,587,457	+				+0.1
2,587,652	-		Pf6N2E2_2182	0.34	+2.1
2,587,671	+		Pf6N2E2_2182	0.36	-0.7
2,587,712	-		Pf6N2E2_2182	0.42	-2.5
2,587,884	-		Pf6N2E2_2182	0.64	-1.2
2,587,884	-		Pf6N2E2_2182	0.64	-1.4
2,587,884	-		Pf6N2E2_2182	0.64	-0.0
2,588,017	+		Pf6N2E2_2182	0.81	-1.5
2,588,017	+		Pf6N2E2_2182	0.81	-1.2
2,588,018	-		Pf6N2E2_2182	0.81	-2.1
2,588,024	-		Pf6N2E2_2182	0.82	-0.5
2,588,092	+				+2.3
2,588,093	-				-0.2
2,588,093	-				-0.0
2,588,199	+				-1.3
2,588,199	+				-0.5
2,588,200	-				-2.0
2,588,200	-				+0.5
2,588,283	+		Pf6N2E2_2183	0.18	+0.6
2,588,284	-		Pf6N2E2_2183	0.18	-0.5
2,588,286	-		Pf6N2E2_2183	0.19	+1.5
2,588,328	+		Pf6N2E2_2183	0.25	-0.2
2,588,329	-		Pf6N2E2_2183	0.25	+1.0
2,588,338	-		Pf6N2E2_2183	0.26	+1.3
2,588,490	+		Pf6N2E2_2183	0.49	+0.4
2,588,503	+		Pf6N2E2_2183	0.51	+1.4
2,588,525	-		Pf6N2E2_2183	0.55	+0.9
2,588,574	-		Pf6N2E2_2183	0.62	+0.8
2,588,597	-		Pf6N2E2_2183	0.65	+0.4
2,588,597	-		Pf6N2E2_2183	0.65	+0.5
2,588,598	+		Pf6N2E2_2183	0.66	-2.4
2,588,598	+		Pf6N2E2_2183	0.66	-0.1
2,588,598	+		Pf6N2E2_2183	0.66	+0.7
2,588,598	+		Pf6N2E2_2183	0.66	-0.8
2,588,598	+		Pf6N2E2_2183	0.66	+0.3
2,588,598	+		Pf6N2E2_2183	0.66	+1.0
2,588,598	+		Pf6N2E2_2183	0.66	+1.4
2,588,599	-		Pf6N2E2_2183	0.66	-1.1
2,588,599	-		Pf6N2E2_2183	0.66	+0.5
2,588,599	-		Pf6N2E2_2183	0.66	+0.9
2,588,599	-		Pf6N2E2_2183	0.66	-0.3
2,588,599	-		Pf6N2E2_2183	0.66	+1.6
2,588,724	+		Pf6N2E2_2183	0.85	+0.4
2,588,724	+		Pf6N2E2_2183	0.85	+0.1
2,588,724	+		Pf6N2E2_2183	0.85	-0.3
2,588,724	+		Pf6N2E2_2183	0.85	-0.4
2,588,725	-		Pf6N2E2_2183	0.85	-0.5
2,588,725	-		Pf6N2E2_2183	0.85	-0.6
2,588,725	-		Pf6N2E2_2183	0.85	+3.7
2,588,725	-		Pf6N2E2_2183	0.85	+0.5
2,588,728	+		Pf6N2E2_2183	0.85	+0.3
2,588,729	-		Pf6N2E2_2183	0.85	+0.4
2,588,729	-		Pf6N2E2_2183	0.85	-1.5
2,588,746	+		Pf6N2E2_2183	0.88	+0.7
2,588,782	+				-0.5
2,588,782	+				+0.0
2,588,782	+				-1.2
2,588,782	+				-0.0
2,588,782	+				+0.5
2,588,783	-				-2.8
2,588,783	-				-0.6
2,588,850	+				+0.3
2,588,850	+				-0.6
2,589,021	+				+0.7
2,589,022	-				+2.8
2,589,022	-				-0.8
2,589,022	-				-0.2
2,589,024	+				+0.4
2,589,024	+				+0.5
2,589,025	-				+0.8
2,589,025	-				-0.2