Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2137

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,541,579	+				+0.5
2,541,579	+				-0.4
2,541,616	+				+0.2
2,541,616	+				-0.6
2,541,616	+				-0.4
2,541,617	-				-0.9
2,541,617	-				+0.9
2,541,617	-				-0.6
2,541,939	+		Pf6N2E2_2136	0.39	+1.0
2,541,939	+		Pf6N2E2_2136	0.39	+0.2
2,541,939	+		Pf6N2E2_2136	0.39	+1.5
2,541,939	+		Pf6N2E2_2136	0.39	-0.7
2,541,940	-		Pf6N2E2_2136	0.39	-0.0
2,541,940	-		Pf6N2E2_2136	0.39	-0.6
2,541,940	-		Pf6N2E2_2136	0.39	+1.4
2,542,101	+		Pf6N2E2_2136	0.58	+0.8
2,542,101	+		Pf6N2E2_2136	0.58	+0.5
2,542,101	+		Pf6N2E2_2136	0.58	-1.2
2,542,101	+		Pf6N2E2_2136	0.58	+0.7
2,542,101	+		Pf6N2E2_2136	0.58	-0.2
2,542,101	+		Pf6N2E2_2136	0.58	+1.6
2,542,101	+		Pf6N2E2_2136	0.58	-0.9
2,542,101	+		Pf6N2E2_2136	0.58	-2.0
2,542,102	-		Pf6N2E2_2136	0.59	-0.4
2,542,102	-		Pf6N2E2_2136	0.59	+1.5
2,542,102	-		Pf6N2E2_2136	0.59	+0.0
2,542,102	-		Pf6N2E2_2136	0.59	-0.2
2,542,176	+		Pf6N2E2_2136	0.68	-0.7
2,542,399	+				-1.0
2,542,400	-				-1.2
2,542,440	+				+0.7
2,542,441	-				+1.0
2,542,441	-				+0.6
2,542,673	-				+0.7
2,542,673	-				+0.3
2,542,673	-				+0.3
2,542,673	-				+1.0
2,542,673	-				+1.2
2,542,682	-				-0.4
2,542,738	+				-0.7
2,542,738	+				+0.8
2,542,738	+				+0.5
2,542,738	+				+0.8
2,542,738	+				+0.8
2,542,738	+				+0.1
2,542,738	+				+0.9
2,542,738	+				-0.5
2,542,738	+				-1.2
2,542,738	+				-0.2
2,542,738	+				+0.8
2,542,739	-				+0.6
2,542,739	-				-1.2
2,542,739	-				+1.6
2,542,739	-				+1.5
2,542,739	-				+0.7
2,542,739	-				+0.1
2,542,844	-		Pf6N2E2_2137	0.11	+0.2
2,542,922	-		Pf6N2E2_2137	0.15	+1.4
2,542,922	-		Pf6N2E2_2137	0.15	+1.5
2,542,922	-		Pf6N2E2_2137	0.15	+1.1
2,542,922	-		Pf6N2E2_2137	0.15	+1.6
2,542,933	+		Pf6N2E2_2137	0.15	+0.7
2,542,933	+		Pf6N2E2_2137	0.15	-0.3
2,542,933	+		Pf6N2E2_2137	0.15	+1.4
2,542,934	-		Pf6N2E2_2137	0.15	+0.5
2,542,934	-		Pf6N2E2_2137	0.15	+0.6
2,542,970	-		Pf6N2E2_2137	0.17	+0.4
2,542,970	-		Pf6N2E2_2137	0.17	-0.2
2,543,035	+		Pf6N2E2_2137	0.19	+0.3
2,543,036	-		Pf6N2E2_2137	0.20	+0.3
2,543,036	-		Pf6N2E2_2137	0.20	+1.4
2,543,305	+		Pf6N2E2_2137	0.31	+0.3
2,543,305	+		Pf6N2E2_2137	0.31	+0.2
2,543,305	+		Pf6N2E2_2137	0.31	+1.8
2,543,306	-		Pf6N2E2_2137	0.31	+0.1
2,543,306	-		Pf6N2E2_2137	0.31	-2.2
2,543,306	-		Pf6N2E2_2137	0.31	-0.3
2,543,435	-		Pf6N2E2_2137	0.36	+1.0
2,543,674	+		Pf6N2E2_2137	0.46	+1.0
2,543,674	+		Pf6N2E2_2137	0.46	-0.9
2,543,803	+		Pf6N2E2_2137	0.52	-1.0
2,543,803	+		Pf6N2E2_2137	0.52	-0.0
2,543,803	+		Pf6N2E2_2137	0.52	+0.7
2,543,803	+		Pf6N2E2_2137	0.52	-0.8
2,543,803	+		Pf6N2E2_2137	0.52	-1.2
2,543,803	+		Pf6N2E2_2137	0.52	-0.3
2,543,803	+		Pf6N2E2_2137	0.52	+0.5
2,543,803	+		Pf6N2E2_2137	0.52	+0.9
2,543,803	+		Pf6N2E2_2137	0.52	+0.5
2,543,803	+		Pf6N2E2_2137	0.52	+0.2
2,543,803	+		Pf6N2E2_2137	0.52	-0.4
2,543,803	+		Pf6N2E2_2137	0.52	+0.7
2,543,803	+		Pf6N2E2_2137	0.52	+0.7
2,543,803	+		Pf6N2E2_2137	0.52	-0.5
2,543,803	+		Pf6N2E2_2137	0.52	+0.4
2,543,804	-		Pf6N2E2_2137	0.52	+1.2
2,543,804	-		Pf6N2E2_2137	0.52	+0.5
2,543,804	-		Pf6N2E2_2137	0.52	+0.9
2,543,804	-		Pf6N2E2_2137	0.52	-1.0
2,543,804	-		Pf6N2E2_2137	0.52	-0.4
2,543,804	-		Pf6N2E2_2137	0.52	-0.8
2,543,804	-		Pf6N2E2_2137	0.52	+1.0
2,543,804	-		Pf6N2E2_2137	0.52	-0.3
2,543,804	-		Pf6N2E2_2137	0.52	-1.2
2,544,343	+		Pf6N2E2_2137	0.75	+0.7
2,544,344	-		Pf6N2E2_2137	0.75	+0.7
2,544,397	+		Pf6N2E2_2137	0.77	+0.1
2,544,397	+		Pf6N2E2_2137	0.77	+0.0
2,544,397	+		Pf6N2E2_2137	0.77	+0.3
2,544,397	+		Pf6N2E2_2137	0.77	+0.1
2,544,397	+		Pf6N2E2_2137	0.77	-0.2
2,544,397	+		Pf6N2E2_2137	0.77	+1.2
2,544,436	+		Pf6N2E2_2137	0.79	-0.7
2,544,436	+		Pf6N2E2_2137	0.79	+0.3
2,544,437	-		Pf6N2E2_2137	0.79	+0.7
2,544,437	-		Pf6N2E2_2137	0.79	-0.3
2,544,496	+		Pf6N2E2_2137	0.81	-0.4
2,544,596	-		Pf6N2E2_2137	0.85	-1.2
2,544,691	+		Pf6N2E2_2137	0.90	+1.3
2,544,691	+		Pf6N2E2_2137	0.90	-1.5
2,544,741	+				-1.4
2,544,741	+				+0.1
2,544,741	+				+0.8
2,544,741	+				-0.7
2,544,741	+				+0.1
2,544,741	+				+0.5
2,544,741	+				-0.5
2,544,742	-				-0.3
2,544,747	+				-0.3
2,544,930	+				+0.8
2,544,930	+				-1.1
2,544,974	+				-0.6
2,544,975	-				+0.1
2,544,975	-				-0.6
2,545,218	-				-0.6
2,545,218	-				+0.6
2,545,227	+				+0.1
2,545,228	-				+0.4
2,545,228	-				+0.5
2,545,290	+				+0.1
2,545,291	-				+1.3
2,545,341	+		Pf6N2E2_2138	0.18	-0.2
2,545,341	+		Pf6N2E2_2138	0.18	+2.1
2,545,341	+		Pf6N2E2_2138	0.18	-0.3
2,545,342	-		Pf6N2E2_2138	0.18	+0.5
2,545,342	-		Pf6N2E2_2138	0.18	+1.9
2,545,436	+		Pf6N2E2_2138	0.39	+0.1
2,545,437	-		Pf6N2E2_2138	0.40	+1.0
2,545,685	+				-0.8
2,545,685	+				+1.1
2,545,685	+				+0.1
2,545,686	-				-0.3
2,545,686	-				+1.7
2,545,686	-				+0.1
2,545,686	-				+1.3
2,545,739	+				+0.3
2,545,739	+				+0.8
2,545,739	+				+0.2
2,545,739	+				-1.2
2,545,739	+				+0.4
2,545,739	+				+0.0
2,545,740	-				-0.9
2,545,740	-				-0.4
2,545,740	-				+0.7
2,545,740	-				-1.6
2,545,740	-				-0.5
2,545,740	-				-0.5
2,545,740	-				-1.2
2,545,740	-				-0.8
2,545,740	-				-0.3
2,545,740	-				-0.1
2,545,740	-				+1.8
2,545,740	-				-0.0
2,545,742	-				-1.0
2,545,818	+				+1.1
2,545,819	-				-0.2
2,545,820	+				+0.3
2,545,821	-				+1.4
2,545,889	+		Pf6N2E2_2139	0.20	-0.2