Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2025

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,413,038	-		Pf6N2E2_2024	0.57	+0.6
2,413,038	-		Pf6N2E2_2024	0.57	+0.7
2,413,246	+		Pf6N2E2_2024	0.84	+0.1
2,413,409	+				+0.7
2,413,410	-				+1.8
2,413,490	+				-0.9
2,413,490	+				-1.0
2,413,493	+				+0.8
2,413,493	+				+0.8
2,413,493	+				-2.3
2,413,494	-				-0.5
2,413,494	-				-1.2
2,413,494	-				-0.4
2,413,494	-				-0.9
2,413,494	-				-0.2
2,413,617	+				+2.2
2,413,790	+				+2.8
2,413,790	+				+1.7
2,413,791	-				-0.4
2,413,791	-				-1.5
2,413,799	+				+1.8
2,413,799	+				+2.9
2,413,799	+				+2.2
2,413,799	+				+3.1
2,413,799	+				+1.6
2,413,800	-				+0.8
2,413,800	-				-0.7
2,413,800	-				+0.8
2,413,800	-				-1.5
2,413,800	-				-0.7
2,413,800	-				+2.3
2,413,800	-				-0.2
2,413,835	-				+0.6
2,413,879	+				+1.7
2,413,934	+				+1.7
2,413,934	+				-0.9
2,413,934	+				-0.2
2,413,935	-				-1.3
2,414,219	+		Pf6N2E2_2025	0.22	-0.6
2,414,286	-		Pf6N2E2_2025	0.28	-1.6
2,414,286	-		Pf6N2E2_2025	0.28	-0.4
2,414,330	+		Pf6N2E2_2025	0.32	-0.9
2,414,459	+		Pf6N2E2_2025	0.45	-0.2
2,414,460	-		Pf6N2E2_2025	0.45	-1.6
2,414,729	+		Pf6N2E2_2025	0.70	+0.1
2,414,730	-		Pf6N2E2_2025	0.70	+0.6
2,414,730	-		Pf6N2E2_2025	0.70	-1.2
2,414,730	-		Pf6N2E2_2025	0.70	-0.7
2,414,754	+		Pf6N2E2_2025	0.72	-0.4
2,414,754	+		Pf6N2E2_2025	0.72	-0.3
2,414,754	+		Pf6N2E2_2025	0.72	+0.3
2,414,754	+		Pf6N2E2_2025	0.72	-1.6
2,414,754	+		Pf6N2E2_2025	0.72	+1.4
2,414,755	-		Pf6N2E2_2025	0.72	-0.2
2,414,755	-		Pf6N2E2_2025	0.72	-2.5
2,414,755	-		Pf6N2E2_2025	0.72	-0.4
2,415,198	-				-0.3
2,415,198	-				-1.2
2,415,198	-				+0.1
2,415,236	+		Pf6N2E2_2026	0.15	-1.7
2,415,236	+		Pf6N2E2_2026	0.15	+0.6
2,415,236	+		Pf6N2E2_2026	0.15	-0.5
2,415,237	-		Pf6N2E2_2026	0.15	-0.1
2,415,237	-		Pf6N2E2_2026	0.15	+0.9
2,415,305	+		Pf6N2E2_2026	0.23	+1.2
2,415,305	+		Pf6N2E2_2026	0.23	+1.3
2,415,305	+		Pf6N2E2_2026	0.23	-2.0
2,415,306	-		Pf6N2E2_2026	0.23	-0.7
2,415,306	-		Pf6N2E2_2026	0.23	+0.8
2,415,435	+		Pf6N2E2_2026	0.39	+2.3
2,415,524	+		Pf6N2E2_2026	0.50	+0.3
2,415,524	+		Pf6N2E2_2026	0.50	+1.6
2,415,524	+		Pf6N2E2_2026	0.50	-0.6
2,415,524	+		Pf6N2E2_2026	0.50	-1.2
2,415,525	-		Pf6N2E2_2026	0.50	-1.2
2,415,525	-		Pf6N2E2_2026	0.50	+0.3
2,415,525	-		Pf6N2E2_2026	0.50	+0.0
2,415,525	-		Pf6N2E2_2026	0.50	-0.2
2,415,547	+		Pf6N2E2_2026	0.53	+0.8
2,415,547	+		Pf6N2E2_2026	0.53	-0.7
2,415,547	+		Pf6N2E2_2026	0.53	+0.7
2,415,547	+		Pf6N2E2_2026	0.53	-0.2
2,415,547	+		Pf6N2E2_2026	0.53	+0.4
2,415,547	+		Pf6N2E2_2026	0.53	-0.5
2,415,548	-		Pf6N2E2_2026	0.53	-0.2
2,415,548	-		Pf6N2E2_2026	0.53	-0.8
2,415,548	-		Pf6N2E2_2026	0.53	+2.0
2,415,613	+		Pf6N2E2_2026	0.61	+0.6
2,415,613	+		Pf6N2E2_2026	0.61	+0.7
2,415,613	+		Pf6N2E2_2026	0.61	-1.0
2,415,614	-		Pf6N2E2_2026	0.61	+2.5
2,415,793	+		Pf6N2E2_2026	0.84	+0.2
2,415,794	-		Pf6N2E2_2026	0.84	+0.3
2,415,850	-				+0.2
2,415,938	-				+0.3
2,415,977	+				+0.3