Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1984

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,348,371	+				-1.9
2,348,371	+				-1.7
2,348,372	-				+0.4
2,348,372	-				-0.4
2,348,372	-				-2.2
2,348,590	-				-0.6
2,348,629	+				-1.5
2,348,629	+				-1.2
2,348,630	-				+0.5
2,348,630	-				+0.7
2,348,631	+				-0.5
2,348,631	+				-3.0
2,348,632	-				+0.7
2,348,632	-				-0.6
2,348,692	+				+0.3
2,348,693	-				-0.5
2,348,802	-				-1.2
2,348,857	+				-1.6
2,348,940	-				+0.0
2,348,940	-				-0.4
2,348,940	-				-0.1
2,349,136	+		Pf6N2E2_1983	0.15	-1.3
2,349,137	-		Pf6N2E2_1983	0.16	-0.7
2,349,187	-		Pf6N2E2_1983	0.47	-1.2
2,349,187	-		Pf6N2E2_1983	0.47	+0.6
2,349,187	-		Pf6N2E2_1983	0.47	-1.2
2,349,281	-				-1.6
2,349,281	-				+0.4
2,349,298	-				-0.9
2,349,494	-		Pf6N2E2_1984	0.30	-0.7
2,349,497	+		Pf6N2E2_1984	0.30	-0.7
2,349,497	+				-1.7
2,349,567	-		Pf6N2E2_1984	0.40	+0.3
2,349,598	-		Pf6N2E2_1984	0.44	+1.4
2,349,669	+		Pf6N2E2_1984	0.54	-1.2
2,349,859	+		Pf6N2E2_1984	0.80	-1.3
2,349,860	-		Pf6N2E2_1984	0.80	-1.6
2,349,904	+		Pf6N2E2_1984	0.87	-3.1
2,350,099	+				-2.2
2,350,787	+				-0.5
2,350,957	+				+0.0