Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1676

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,981,472	+		Pf6N2E2_1675	0.21	-1.8
1,981,473	-		Pf6N2E2_1675	0.21	-0.8
1,981,539	+		Pf6N2E2_1675	0.27	+1.9
1,981,539	+		Pf6N2E2_1675	0.27	+0.2
1,981,599	+				+1.3
1,981,599	+		Pf6N2E2_1675	0.32	+0.1
1,981,600	-				+0.8
1,981,632	+		Pf6N2E2_1675	0.34	+0.3
1,981,632	+		Pf6N2E2_1675	0.34	-0.9
1,981,723	+		Pf6N2E2_1675	0.42	-0.2
1,981,751	+		Pf6N2E2_1675	0.44	+1.0
1,981,751	+				+1.8
1,981,751	+		Pf6N2E2_1675	0.44	+0.7
1,981,751	+		Pf6N2E2_1675	0.44	+0.6
1,981,751	+		Pf6N2E2_1675	0.44	+2.0
1,981,755	+		Pf6N2E2_1675	0.45	+1.3
1,981,755	+		Pf6N2E2_1675	0.45	+0.9
1,981,921	+		Pf6N2E2_1675	0.58	+0.5
1,981,941	+		Pf6N2E2_1675	0.60	+1.1
1,981,942	-		Pf6N2E2_1675	0.60	-0.2
1,981,974	+		Pf6N2E2_1675	0.63	+0.1
1,982,017	+		Pf6N2E2_1675	0.66	+3.5
1,982,017	+		Pf6N2E2_1675	0.66	-0.2
1,982,017	+				-0.2
1,982,017	+		Pf6N2E2_1675	0.66	+1.5
1,982,017	+		Pf6N2E2_1675	0.66	+1.1
1,982,017	+		Pf6N2E2_1675	0.66	+0.1
1,982,017	+		Pf6N2E2_1675	0.66	+2.9
1,982,018	-		Pf6N2E2_1675	0.67	-0.7
1,982,064	+		Pf6N2E2_1675	0.70	+0.5
1,982,158	+		Pf6N2E2_1675	0.78	+1.6
1,982,158	+		Pf6N2E2_1675	0.78	+0.3
1,982,158	+		Pf6N2E2_1675	0.78	+1.1
1,982,159	-		Pf6N2E2_1675	0.78	-0.8
1,982,203	+		Pf6N2E2_1675	0.82	+0.2
1,982,203	+		Pf6N2E2_1675	0.82	+1.3
1,982,203	+		Pf6N2E2_1675	0.82	+0.2
1,982,291	+		Pf6N2E2_1675	0.89	+1.3
1,982,674	+		Pf6N2E2_1676	0.56	-0.8
1,982,747	+		Pf6N2E2_1676	0.72	-0.5
1,982,747	+		Pf6N2E2_1676	0.72	-1.0
1,982,747	+		Pf6N2E2_1676	0.72	-0.8
1,982,845	+				-0.6
1,982,845	+				+1.1
1,982,845	+				-0.9
1,982,846	-				-2.1
1,982,855	+				+0.3
1,982,866	+				-0.4
1,982,995	-				-1.2
1,983,010	+				+1.4
1,983,032	-				+0.1
1,983,065	+				+1.9
1,983,066	-				+1.1
1,983,066	-				-0.2
1,983,191	-		Pf6N2E2_1677	0.16	+1.6
1,983,411	+		Pf6N2E2_1677	0.37	-1.6
1,983,665	+		Pf6N2E2_1677	0.61	-0.7
1,983,665	+		Pf6N2E2_1677	0.61	+1.6
1,983,689	+		Pf6N2E2_1677	0.63	+0.1
1,983,689	+		Pf6N2E2_1677	0.63	-0.1
1,983,689	+		Pf6N2E2_1677	0.63	+0.3
1,983,690	-		Pf6N2E2_1677	0.63	-1.2
1,983,690	-		Pf6N2E2_1677	0.63	+1.8
1,983,690	-		Pf6N2E2_1677	0.63	+1.6
1,983,698	+		Pf6N2E2_1677	0.64	-0.0
1,983,699	-		Pf6N2E2_1677	0.64	+1.9
1,983,699	-		Pf6N2E2_1677	0.64	+0.6
1,983,792	-		Pf6N2E2_1677	0.73	+0.8