Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1600

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,871,319	+		Pf6N2E2_1598	0.66	+1.2
1,871,320	-		Pf6N2E2_1598	0.66	-1.5
1,871,368	-		Pf6N2E2_1598	0.76	-0.3
1,871,404	+		Pf6N2E2_1598	0.84	+0.9
1,871,404	+		Pf6N2E2_1598	0.84	-1.0
1,871,405	-		Pf6N2E2_1598	0.84	+0.1
1,871,405	-		Pf6N2E2_1598	0.84	-0.1
1,871,524	-				-0.3
1,871,553	+		Pf6N2E2_1599	0.10	-1.3
1,871,554	-		Pf6N2E2_1599	0.10	-2.1
1,871,554	-		Pf6N2E2_1599	0.10	-0.8
1,871,554	-		Pf6N2E2_1599	0.10	-0.3
1,871,554	-		Pf6N2E2_1599	0.10	+0.3
1,871,554	-		Pf6N2E2_1599	0.10	-0.4
1,871,554	-		Pf6N2E2_1599	0.10	-0.1
1,871,554	-		Pf6N2E2_1599	0.10	-0.3
1,871,557	-		Pf6N2E2_1599	0.11	+1.3
1,871,557	-		Pf6N2E2_1599	0.11	-0.6
1,871,715	+		Pf6N2E2_1599	0.37	+0.8
1,871,781	-		Pf6N2E2_1599	0.48	+1.5
1,872,224	-				+0.6
1,872,224	-				-1.4
1,872,224	-				-1.3
1,872,224	-				+1.3
1,872,370	+				-0.6
1,872,370	+				+0.5
1,872,524	-		Pf6N2E2_1600	0.18	-0.5
1,872,524	-		Pf6N2E2_1600	0.18	+0.6
1,872,982	+		Pf6N2E2_1600	0.46	+1.2
1,873,103	+		Pf6N2E2_1600	0.53	-0.2
1,873,103	+		Pf6N2E2_1600	0.53	+0.2
1,873,104	-		Pf6N2E2_1600	0.53	-0.8
1,873,229	+		Pf6N2E2_1600	0.61	+0.1
1,873,397	-		Pf6N2E2_1600	0.71	-1.0
1,873,514	+		Pf6N2E2_1600	0.78	-1.6
1,873,595	+		Pf6N2E2_1600	0.83	+0.4
1,873,595	+		Pf6N2E2_1600	0.83	+0.3
1,873,596	-		Pf6N2E2_1600	0.83	-0.9
1,873,889	+				-0.3
1,873,890	-				+0.7
1,874,285	+		Pf6N2E2_1601	0.70	-1.0
1,874,340	+		Pf6N2E2_1601	0.79	+0.3
1,874,340	+		Pf6N2E2_1601	0.79	-0.7
1,874,340	+		Pf6N2E2_1601	0.79	-0.6
1,874,341	-		Pf6N2E2_1601	0.80	+0.4
1,874,341	-		Pf6N2E2_1601	0.80	-0.4
1,874,341	-		Pf6N2E2_1601	0.80	-1.5
1,874,341	-		Pf6N2E2_1601	0.80	+2.5
1,874,341	-		Pf6N2E2_1601	0.80	+1.6
1,874,341	-		Pf6N2E2_1601	0.80	-0.5
1,874,341	-		Pf6N2E2_1601	0.80	+2.4
1,874,341	-		Pf6N2E2_1601	0.80	+0.9
1,874,341	-		Pf6N2E2_1601	0.80	-0.9
1,874,343	-		Pf6N2E2_1601	0.80	+1.0
1,874,391	+		Pf6N2E2_1601	0.88	+0.0
1,874,391	+		Pf6N2E2_1601	0.88	-0.9
1,874,392	-		Pf6N2E2_1601	0.88	+0.6
1,874,508	-				-0.7
1,874,543	+				-1.2
1,874,543	+				+0.1
1,874,543	+				-0.4
1,874,766	+		Pf6N2E2_1602	0.30	-1.3
1,874,766	+		Pf6N2E2_1602	0.30	-0.3
1,874,768	+		Pf6N2E2_1602	0.30	+3.0
1,874,768	+		Pf6N2E2_1602	0.30	+0.2
1,874,831	+		Pf6N2E2_1602	0.38	+0.3