Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1427

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,674,819	+		Pf6N2E2_1426	0.45	+1.7
1,674,819	+		Pf6N2E2_1426	0.45	-1.2
1,674,820	-		Pf6N2E2_1426	0.45	+1.4
1,674,820	-		Pf6N2E2_1426	0.45	+0.6
1,674,820	-		Pf6N2E2_1426	0.45	-0.2
1,674,924	+		Pf6N2E2_1426	0.53	+0.0
1,674,924	+		Pf6N2E2_1426	0.53	+0.2
1,674,925	-		Pf6N2E2_1426	0.53	+0.5
1,674,925	-		Pf6N2E2_1426	0.53	+0.2
1,674,925	-		Pf6N2E2_1426	0.53	-0.1
1,675,125	+		Pf6N2E2_1426	0.68	+0.6
1,675,125	+		Pf6N2E2_1426	0.68	-0.1
1,675,125	+		Pf6N2E2_1426	0.68	-1.5
1,675,126	-		Pf6N2E2_1426	0.68	+0.4
1,675,126	-		Pf6N2E2_1426	0.68	+0.4
1,675,176	+		Pf6N2E2_1426	0.71	+0.7
1,675,176	+		Pf6N2E2_1426	0.71	+1.2
1,675,177	-		Pf6N2E2_1426	0.71	+0.7
1,675,302	+		Pf6N2E2_1426	0.81	-0.9
1,675,329	+		Pf6N2E2_1426	0.83	+0.7
1,675,329	+		Pf6N2E2_1426	0.83	+2.0
1,675,330	-		Pf6N2E2_1426	0.83	+0.3
1,675,559	-				+0.4
1,675,577	+				+1.7
1,675,577	+				+0.4
1,675,578	-				+0.6
1,675,587	-				+0.8
1,675,596	+				-1.0
1,675,666	-				+0.5
1,675,804	+		Pf6N2E2_1427	0.10	+1.7
1,675,805	-		Pf6N2E2_1427	0.10	+1.4
1,675,858	+		Pf6N2E2_1427	0.14	+0.7
1,675,918	+		Pf6N2E2_1427	0.19	+0.6
1,675,918	+		Pf6N2E2_1427	0.19	+0.2
1,675,918	+		Pf6N2E2_1427	0.19	+0.7
1,676,207	-		Pf6N2E2_1427	0.42	+2.2
1,676,260	+		Pf6N2E2_1427	0.46	+1.3
1,676,261	-		Pf6N2E2_1427	0.46	+1.2
1,676,440	+		Pf6N2E2_1427	0.60	-1.3
1,676,440	+		Pf6N2E2_1427	0.60	+0.3
1,676,440	+		Pf6N2E2_1427	0.60	+0.7
1,676,441	-		Pf6N2E2_1427	0.60	-0.6
1,676,441	-		Pf6N2E2_1427	0.60	+0.1
1,677,202	+				-1.3
1,677,255	+				-1.3
1,677,430	-		Pf6N2E2_1428	0.17	+1.1
1,677,430	-		Pf6N2E2_1428	0.17	+0.5
1,677,430	-		Pf6N2E2_1428	0.17	-0.5
1,677,430	-		Pf6N2E2_1428	0.17	-0.1
1,677,708	+		Pf6N2E2_1428	0.42	-3.0
1,677,708	+		Pf6N2E2_1428	0.42	-1.1
1,677,709	-		Pf6N2E2_1428	0.42	-2.3
1,677,709	-		Pf6N2E2_1428	0.42	+0.7
1,677,709	-		Pf6N2E2_1428	0.42	+0.3
1,677,709	-		Pf6N2E2_1428	0.42	+0.7
1,677,732	+		Pf6N2E2_1428	0.44	-0.8
1,677,732	+		Pf6N2E2_1428	0.44	+0.0
1,677,732	+		Pf6N2E2_1428	0.44	+0.8
1,677,733	-		Pf6N2E2_1428	0.44	+0.3
1,677,733	-		Pf6N2E2_1428	0.44	+0.4
1,677,733	-		Pf6N2E2_1428	0.44	+0.5
1,677,780	-		Pf6N2E2_1428	0.48	+1.4
1,677,780	-		Pf6N2E2_1428	0.48	-0.6
1,677,853	-		Pf6N2E2_1428	0.55	+0.1
1,677,873	-		Pf6N2E2_1428	0.57	-0.9