Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1318

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,551,411	+		Pf6N2E2_1317	0.59	-0.8
1,551,735	+		Pf6N2E2_1317	0.86	-0.6
1,551,906	+				-0.1
1,551,907	-				-0.0
1,552,131	-				+0.6
1,552,133	+				-1.8
1,552,228	+				+0.9
1,552,228	+				+1.4
1,552,229	-				-1.0
1,552,229	-				+0.2
1,552,229	-				-0.5
1,552,231	+				-1.7
1,552,249	+				+0.2
1,552,249	+				+1.0
1,552,428	+		Pf6N2E2_1318	0.17	-0.4
1,552,549	+		Pf6N2E2_1318	0.27	-1.5
1,552,585	+		Pf6N2E2_1318	0.29	-1.6
1,552,586	-		Pf6N2E2_1318	0.29	+1.8
1,552,653	+		Pf6N2E2_1318	0.35	-1.4
1,552,717	+		Pf6N2E2_1318	0.39	+0.4
1,552,969	+		Pf6N2E2_1318	0.59	+0.7
1,553,041	+		Pf6N2E2_1318	0.64	-0.1
1,553,041	+		Pf6N2E2_1318	0.64	-1.5
1,553,042	-		Pf6N2E2_1318	0.65	-0.8
1,553,042	-		Pf6N2E2_1318	0.65	+3.0
1,553,069	-		Pf6N2E2_1318	0.67	+1.2
1,553,069	-		Pf6N2E2_1318	0.67	-1.0
1,553,519	+				-0.2
1,553,519	+				-0.0
1,553,519	+				-1.1
1,553,519	+				-0.7
1,553,519	+				-0.2
1,553,520	-				+0.8
1,553,520	-				-0.0
1,553,520	-				-1.4
1,553,520	-				-0.4
1,553,520	-				+2.2
1,553,520	-				-0.5
1,553,839	-		Pf6N2E2_1319	0.42	+0.4
1,553,874	+		Pf6N2E2_1319	0.52	-0.9
1,553,874	+		Pf6N2E2_1319	0.52	-1.0
1,553,874	+		Pf6N2E2_1319	0.52	-1.4
1,553,952	+		Pf6N2E2_1319	0.73	+0.1
1,554,033	+				+0.4
1,554,033	+				+0.6
1,554,153	-				+0.9
1,554,187	-		Pf6N2E2_1320	0.13	+0.1
1,554,187	-		Pf6N2E2_1320	0.13	+0.4
1,554,258	+		Pf6N2E2_1320	0.24	-1.9
1,554,258	+		Pf6N2E2_1320	0.24	+1.2
1,554,271	-		Pf6N2E2_1320	0.26	+0.1
1,554,379	-		Pf6N2E2_1320	0.42	+0.6