Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1140

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,335,865	-		Pf6N2E2_1139	0.11	-0.8
1,335,867	+		Pf6N2E2_1139	0.11	+1.2
1,335,867	+		Pf6N2E2_1139	0.11	-1.1
1,335,868	-		Pf6N2E2_1139	0.11	-0.7
1,335,868	-		Pf6N2E2_1139	0.11	-0.1
1,336,053	+		Pf6N2E2_1139	0.30	+0.2
1,336,054	-		Pf6N2E2_1139	0.30	-0.1
1,336,072	+		Pf6N2E2_1139	0.32	+0.8
1,336,072	+		Pf6N2E2_1139	0.32	+1.4
1,336,073	-		Pf6N2E2_1139	0.32	-2.7
1,336,174	-		Pf6N2E2_1139	0.43	-2.5
1,336,266	+		Pf6N2E2_1139	0.52	+1.6
1,336,305	+		Pf6N2E2_1139	0.56	+0.3
1,336,305	+		Pf6N2E2_1139	0.56	-1.1
1,336,306	-		Pf6N2E2_1139	0.56	-0.1
1,336,306	-		Pf6N2E2_1139	0.56	-0.3
1,336,416	+		Pf6N2E2_1139	0.68	+0.1
1,336,417	-		Pf6N2E2_1139	0.68	+0.3
1,336,417	-		Pf6N2E2_1139	0.68	+0.7
1,336,417	-		Pf6N2E2_1139	0.68	-0.2
1,336,417	-		Pf6N2E2_1139	0.68	+0.9
1,336,417	-		Pf6N2E2_1139	0.68	+0.1
1,336,418	+		Pf6N2E2_1139	0.68	-0.7
1,336,497	+		Pf6N2E2_1139	0.76	+1.6
1,336,498	-		Pf6N2E2_1139	0.76	+1.5
1,336,498	-		Pf6N2E2_1139	0.76	+0.3
1,336,498	-		Pf6N2E2_1139	0.76	+0.3
1,336,498	-		Pf6N2E2_1139	0.76	+0.7
1,336,707	+				+1.7
1,336,716	+				+0.4
1,336,719	+				+0.1
1,336,720	-				+1.0
1,336,779	+				+0.7
1,336,779	+				-0.3
1,336,780	-				+0.3
1,336,780	-				-1.9
1,336,780	-				+0.2
1,336,783	+				-0.3
1,336,783	+				-1.8
1,336,784	-				+0.9
1,336,817	+				-1.3
1,336,817	+				-0.3
1,336,921	+		Pf6N2E2_1140	0.21	-0.7
1,336,922	-		Pf6N2E2_1140	0.21	-0.6
1,336,922	-		Pf6N2E2_1140	0.21	+0.4
1,337,001	+		Pf6N2E2_1140	0.32	-1.1
1,337,590	+		Pf6N2E2_1141	0.28	+1.0
1,337,600	-		Pf6N2E2_1141	0.31	+2.0
1,337,600	-		Pf6N2E2_1141	0.31	+1.8
1,337,671	+		Pf6N2E2_1141	0.55	-0.1
1,337,671	+		Pf6N2E2_1141	0.55	+0.2
1,337,672	-		Pf6N2E2_1141	0.55	-0.0
1,337,856	+				-1.8
1,337,856	+				-0.1
1,337,856	+				+0.0
1,337,993	+				-0.3
1,338,071	+		Pf6N2E2_1142	0.15	-0.2
1,338,072	-		Pf6N2E2_1142	0.15	+0.3
1,338,072	-		Pf6N2E2_1142	0.15	-1.3
1,338,116	+		Pf6N2E2_1142	0.18	+0.5
1,338,116	+		Pf6N2E2_1142	0.18	+2.1
1,338,194	+		Pf6N2E2_1142	0.23	-1.3
1,338,194	+		Pf6N2E2_1142	0.23	-0.2
1,338,194	+		Pf6N2E2_1142	0.23	+0.8
1,338,257	+		Pf6N2E2_1142	0.27	-0.8
1,338,257	+		Pf6N2E2_1142	0.27	-0.8
1,338,257	+		Pf6N2E2_1142	0.27	-0.4
1,338,258	-		Pf6N2E2_1142	0.28	+0.7
1,338,258	-		Pf6N2E2_1142	0.28	-0.7
1,338,258	-		Pf6N2E2_1142	0.28	-2.1
1,338,302	+		Pf6N2E2_1142	0.30	+0.1
1,338,303	-		Pf6N2E2_1142	0.31	+0.5
1,338,305	+		Pf6N2E2_1142	0.31	-0.3
1,338,305	+		Pf6N2E2_1142	0.31	-0.3
1,338,306	-		Pf6N2E2_1142	0.31	-0.0
1,338,306	-		Pf6N2E2_1142	0.31	+0.4
1,338,369	+		Pf6N2E2_1142	0.35	-0.5
1,338,389	+		Pf6N2E2_1142	0.36	+1.2
1,338,389	+		Pf6N2E2_1142	0.36	+1.7