Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1055

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,228,811	+		Pf6N2E2_1054	0.57	+0.5
1,228,811	+		Pf6N2E2_1054	0.57	+0.1
1,228,869	-		Pf6N2E2_1054	0.61	+0.3
1,229,011	+		Pf6N2E2_1054	0.72	+0.8
1,229,012	-		Pf6N2E2_1054	0.72	-0.5
1,229,245	-				+0.7
1,229,348	+				-0.3
1,229,621	+		Pf6N2E2_1055	0.12	-0.6
1,229,621	+		Pf6N2E2_1055	0.12	+1.3
1,229,621	+		Pf6N2E2_1055	0.12	-1.3
1,229,622	-		Pf6N2E2_1055	0.12	+0.0
1,229,687	-		Pf6N2E2_1055	0.19	-0.5
1,229,687	-		Pf6N2E2_1055	0.19	-0.8
1,229,804	+		Pf6N2E2_1055	0.32	-1.3
1,229,901	+		Pf6N2E2_1055	0.42	-0.7
1,229,901	+		Pf6N2E2_1055	0.42	+0.2
1,229,902	-		Pf6N2E2_1055	0.42	-2.3
1,229,902	-		Pf6N2E2_1055	0.42	+0.3
1,229,930	+		Pf6N2E2_1055	0.45	-0.2
1,229,930	+		Pf6N2E2_1055	0.45	-0.1
1,229,931	-		Pf6N2E2_1055	0.46	-0.8
1,229,931	-		Pf6N2E2_1055	0.46	+0.7
1,229,963	-		Pf6N2E2_1055	0.49	-0.1
1,229,963	-		Pf6N2E2_1055	0.49	-1.1
1,230,016	+		Pf6N2E2_1055	0.55	-0.1
1,230,016	+		Pf6N2E2_1055	0.55	-1.1
1,230,016	+		Pf6N2E2_1055	0.55	-0.0
1,230,016	+		Pf6N2E2_1055	0.55	-1.6
1,230,017	-		Pf6N2E2_1055	0.55	-0.6
1,230,017	-		Pf6N2E2_1055	0.55	+0.3
1,230,017	-		Pf6N2E2_1055	0.55	-1.0
1,230,254	+		Pf6N2E2_1055	0.81	+0.3
1,230,255	-		Pf6N2E2_1055	0.81	-0.2
1,230,255	-		Pf6N2E2_1055	0.81	-0.1
1,230,255	-		Pf6N2E2_1055	0.81	-0.4
1,230,258	+		Pf6N2E2_1055	0.81	-2.0
1,230,259	-		Pf6N2E2_1055	0.81	+0.4
1,230,259	-		Pf6N2E2_1055	0.81	-0.4
1,230,259	-		Pf6N2E2_1055	0.81	+1.4
1,230,259	-		Pf6N2E2_1055	0.81	+0.2
1,230,259	-		Pf6N2E2_1055	0.81	-0.5
1,230,419	+				-0.7
1,230,419	+				-3.1
1,230,420	-				-0.2
1,230,472	-				+3.4
1,230,547	+				-0.2
1,230,609	+				-0.8
1,230,609	+				-2.3
1,230,609	+				+0.8
1,230,660	+				+4.8
1,230,660	+				+5.8
1,230,660	+				+4.9
1,230,667	+				+4.4
1,230,667	+				-0.1
1,231,064	+		Pf6N2E2_1056	0.37	+4.3
1,231,085	+		Pf6N2E2_1056	0.39	+3.8