Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS29530 and PFLU_RS29535 are separated by 6 nucleotides PFLU_RS29535 and PFLU_RS29540 overlap by 4 nucleotides PFLU_RS29540 and PFLU_RS29545 are separated by 168 nucleotides
PFLU_RS29530: PFLU_RS29530 - tonB-system energizer ExbB, at 6,554,133 to 6,555,101
_RS29530
PFLU_RS29535: PFLU_RS29535 - TonB system transport protein ExbD, at 6,555,108 to 6,555,533
_RS29535
PFLU_RS29540: PFLU_RS29540 - energy transducer TonB, at 6,555,530 to 6,556,279
_RS29540
PFLU_RS29545: PFLU_RS29545 - hydrogen peroxide-inducible genes activator, at 6,556,448 to 6,557,368
_RS29545
Position (kb)
6555
6556 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6556.356 kb on + strand at 6556.356 kb on + strand at 6556.357 kb on - strand at 6556.357 kb on - strand at 6556.357 kb on - strand at 6556.357 kb on - strand at 6556.357 kb on - strand at 6556.375 kb on - strand at 6556.388 kb on + strand at 6556.400 kb on - strand at 6556.415 kb on + strand at 6556.416 kb on - strand at 6556.416 kb on - strand at 6556.447 kb on + strand at 6556.456 kb on + strand at 6556.456 kb on + strand at 6556.456 kb on + strand at 6556.457 kb on - strand at 6556.457 kb on - strand at 6556.457 kb on - strand at 6556.457 kb on - strand at 6556.457 kb on - strand at 6556.464 kb on + strand at 6556.464 kb on + strand at 6556.465 kb on - strand at 6556.465 kb on - strand at 6556.465 kb on - strand at 6556.465 kb on - strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.469 kb on + strand at 6556.470 kb on - strand at 6556.470 kb on - strand at 6556.470 kb on - strand at 6556.470 kb on - strand at 6556.470 kb on - strand at 6556.470 kb on - strand at 6556.470 kb on - strand at 6556.470 kb on - strand at 6556.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 6,556,356 + -0.4 6,556,356 + +0.4 6,556,357 - +0.1 6,556,357 - +0.3 6,556,357 - +1.0 6,556,357 - +1.1 6,556,357 - -0.3 6,556,375 - -1.0 6,556,388 + -0.8 6,556,400 - +1.4 6,556,415 + +0.5 6,556,416 - -0.4 6,556,416 - -1.7 6,556,447 + -1.1 6,556,456 + +0.2 6,556,456 + +0.6 6,556,456 + +1.1 6,556,457 - -0.5 6,556,457 - +1.6 6,556,457 - -0.3 6,556,457 - +2.3 6,556,457 - +2.3 6,556,464 + +1.5 6,556,464 + +1.3 6,556,465 - +0.1 6,556,465 - +1.1 6,556,465 - -2.3 6,556,465 - +0.9 6,556,469 + -1.5 6,556,469 + -0.3 6,556,469 + +1.0 6,556,469 + +1.0 6,556,469 + +0.6 6,556,469 + +0.6 6,556,469 + +2.0 6,556,469 + +1.3 6,556,469 + +0.7 6,556,470 - +1.3 6,556,470 - +0.4 6,556,470 - +0.4 6,556,470 - +0.0 6,556,470 - +2.2 6,556,470 - +0.3 6,556,470 - +0.5 6,556,470 - -0.2 6,556,470 - -0.9
Or see this region's nucleotide sequence