Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06045 and AZOBR_RS06050 are separated by 230 nucleotides AZOBR_RS06050 and AZOBR_RS06055 are separated by 19 nucleotides AZOBR_RS06055 and AZOBR_RS06060 are separated by 44 nucleotides
AZOBR_RS06045: AZOBR_RS06045 - murein transglycosylase, at 1,282,666 to 1,283,976
_RS06045
AZOBR_RS06050: AZOBR_RS06050 - hypothetical protein, at 1,284,207 to 1,284,557
_RS06050
AZOBR_RS06055: AZOBR_RS06055 - hypothetical protein, at 1,284,577 to 1,285,362
_RS06055
AZOBR_RS06060: AZOBR_RS06060 - membrane protein, at 1,285,407 to 1,288,049
_RS06060
Position (kb)
1284
1285 Strain fitness (log2 ratio)
-1
0
1 at 1283.456 kb on + strand, within AZOBR_RS06045 at 1283.456 kb on + strand, within AZOBR_RS06045 at 1283.654 kb on + strand at 1283.655 kb on - strand, within AZOBR_RS06045 at 1284.016 kb on + strand at 1284.016 kb on + strand at 1284.069 kb on + strand at 1284.069 kb on + strand at 1284.069 kb on + strand at 1284.070 kb on - strand at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.453 kb on + strand, within AZOBR_RS06050 at 1284.512 kb on + strand, within AZOBR_RS06050 at 1284.513 kb on - strand, within AZOBR_RS06050 at 1284.555 kb on + strand at 1284.556 kb on - strand at 1284.556 kb on - strand at 1284.698 kb on - strand, within AZOBR_RS06055 at 1284.739 kb on + strand, within AZOBR_RS06055 at 1284.739 kb on + strand, within AZOBR_RS06055 at 1284.739 kb on + strand, within AZOBR_RS06055 at 1285.177 kb on + strand, within AZOBR_RS06055 at 1285.178 kb on - strand, within AZOBR_RS06055 at 1285.178 kb on - strand, within AZOBR_RS06055
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 1,283,456 + AZOBR_RS06045 0.60 -0.2 1,283,456 + AZOBR_RS06045 0.60 +0.0 1,283,654 + +0.7 1,283,655 - AZOBR_RS06045 0.75 +1.0 1,284,016 + -0.6 1,284,016 + +0.0 1,284,069 + +0.5 1,284,069 + +0.2 1,284,069 + -0.1 1,284,070 - -0.5 1,284,354 + AZOBR_RS06050 0.42 +0.3 1,284,354 + AZOBR_RS06050 0.42 +0.5 1,284,354 + AZOBR_RS06050 0.42 +0.8 1,284,354 + AZOBR_RS06050 0.42 +0.5 1,284,354 + AZOBR_RS06050 0.42 -0.5 1,284,354 + AZOBR_RS06050 0.42 +0.4 1,284,354 + AZOBR_RS06050 0.42 +1.1 1,284,355 - AZOBR_RS06050 0.42 +0.3 1,284,355 - AZOBR_RS06050 0.42 +0.5 1,284,355 - AZOBR_RS06050 0.42 +1.3 1,284,355 - AZOBR_RS06050 0.42 +0.6 1,284,355 - AZOBR_RS06050 0.42 +0.1 1,284,355 - AZOBR_RS06050 0.42 -0.9 1,284,355 - AZOBR_RS06050 0.42 +0.3 1,284,355 - AZOBR_RS06050 0.42 +0.4 1,284,355 - AZOBR_RS06050 0.42 -0.0 1,284,453 + AZOBR_RS06050 0.70 +0.0 1,284,512 + AZOBR_RS06050 0.87 +1.3 1,284,513 - AZOBR_RS06050 0.87 +0.2 1,284,555 + -0.3 1,284,556 - -1.3 1,284,556 - +0.1 1,284,698 - AZOBR_RS06055 0.15 -0.2 1,284,739 + AZOBR_RS06055 0.21 -0.3 1,284,739 + AZOBR_RS06055 0.21 +0.0 1,284,739 + AZOBR_RS06055 0.21 -0.8 1,285,177 + AZOBR_RS06055 0.76 -0.4 1,285,178 - AZOBR_RS06055 0.76 -0.8 1,285,178 - AZOBR_RS06055 0.76 +0.3
Or see this region's nucleotide sequence