Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05745 and AZOBR_RS05750 are separated by 197 nucleotides AZOBR_RS05750 and AZOBR_RS05755 are separated by 306 nucleotides AZOBR_RS05755 and AZOBR_RS05760 are separated by 252 nucleotides
AZOBR_RS05745: AZOBR_RS05745 - conserved exported protein of unknown function, at 1,218,045 to 1,218,320
_RS05745
AZOBR_RS05750: AZOBR_RS05750 - hypothetical protein, at 1,218,518 to 1,218,895
_RS05750
AZOBR_RS05755: AZOBR_RS05755 - Butyryl-CoA dehydrogenase (EC 1.3.8.1) (from data) , at 1,219,202 to 1,221,001
_RS05755
AZOBR_RS05760: AZOBR_RS05760 - hypothetical protein, at 1,221,254 to 1,222,294
_RS05760
Position (kb)
1219
1220
1221
1222 Strain fitness (log2 ratio)
-2
-1
0
1 at 1218.603 kb on + strand, within AZOBR_RS05750 at 1218.603 kb on + strand, within AZOBR_RS05750 at 1218.618 kb on + strand, within AZOBR_RS05750 at 1218.738 kb on + strand, within AZOBR_RS05750 at 1218.739 kb on - strand, within AZOBR_RS05750 at 1218.739 kb on - strand, within AZOBR_RS05750 at 1219.428 kb on + strand, within AZOBR_RS05755 at 1219.429 kb on - strand, within AZOBR_RS05755 at 1219.687 kb on - strand, within AZOBR_RS05755 at 1220.136 kb on + strand, within AZOBR_RS05755 at 1220.136 kb on + strand, within AZOBR_RS05755 at 1220.137 kb on - strand, within AZOBR_RS05755 at 1220.440 kb on - strand, within AZOBR_RS05755 at 1220.707 kb on - strand, within AZOBR_RS05755 at 1221.143 kb on - strand at 1221.143 kb on - strand at 1221.462 kb on - strand, within AZOBR_RS05760 at 1221.530 kb on + strand, within AZOBR_RS05760 at 1221.530 kb on + strand, within AZOBR_RS05760 at 1221.569 kb on + strand, within AZOBR_RS05760 at 1221.570 kb on - strand, within AZOBR_RS05760 at 1221.650 kb on + strand, within AZOBR_RS05760 at 1221.651 kb on - strand, within AZOBR_RS05760 at 1221.671 kb on + strand, within AZOBR_RS05760 at 1221.671 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.716 kb on + strand, within AZOBR_RS05760 at 1221.717 kb on - strand, within AZOBR_RS05760 at 1221.717 kb on - strand, within AZOBR_RS05760 at 1221.881 kb on + strand, within AZOBR_RS05760 at 1221.881 kb on + strand, within AZOBR_RS05760 at 1221.881 kb on + strand, within AZOBR_RS05760 at 1221.882 kb on - strand, within AZOBR_RS05760 at 1221.882 kb on - strand, within AZOBR_RS05760
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 1,218,603 + AZOBR_RS05750 0.22 -0.4 1,218,603 + AZOBR_RS05750 0.22 +0.6 1,218,618 + AZOBR_RS05750 0.26 -0.4 1,218,738 + AZOBR_RS05750 0.58 -0.3 1,218,739 - AZOBR_RS05750 0.58 +0.6 1,218,739 - AZOBR_RS05750 0.58 +0.6 1,219,428 + AZOBR_RS05755 0.13 -0.5 1,219,429 - AZOBR_RS05755 0.13 +0.6 1,219,687 - AZOBR_RS05755 0.27 +1.3 1,220,136 + AZOBR_RS05755 0.52 +0.2 1,220,136 + AZOBR_RS05755 0.52 -0.5 1,220,137 - AZOBR_RS05755 0.52 -2.2 1,220,440 - AZOBR_RS05755 0.69 +0.1 1,220,707 - AZOBR_RS05755 0.84 -0.6 1,221,143 - +0.8 1,221,143 - +1.2 1,221,462 - AZOBR_RS05760 0.20 -0.7 1,221,530 + AZOBR_RS05760 0.27 -0.4 1,221,530 + AZOBR_RS05760 0.27 -1.3 1,221,569 + AZOBR_RS05760 0.30 -0.3 1,221,570 - AZOBR_RS05760 0.30 -1.0 1,221,650 + AZOBR_RS05760 0.38 -1.9 1,221,651 - AZOBR_RS05760 0.38 -1.3 1,221,671 + AZOBR_RS05760 0.40 -1.7 1,221,671 + AZOBR_RS05760 0.40 -1.4 1,221,716 + AZOBR_RS05760 0.44 -1.5 1,221,716 + AZOBR_RS05760 0.44 -0.6 1,221,716 + AZOBR_RS05760 0.44 -1.4 1,221,716 + AZOBR_RS05760 0.44 +0.9 1,221,717 - AZOBR_RS05760 0.44 -1.9 1,221,717 - AZOBR_RS05760 0.44 -0.8 1,221,881 + AZOBR_RS05760 0.60 -1.5 1,221,881 + AZOBR_RS05760 0.60 -1.2 1,221,881 + AZOBR_RS05760 0.60 -2.5 1,221,882 - AZOBR_RS05760 0.60 -1.5 1,221,882 - AZOBR_RS05760 0.60 -1.4
Or see this region's nucleotide sequence