Experiment: nitrate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18810 and ABZR86_RS18815 are separated by 360 nucleotides ABZR86_RS18815 and ABZR86_RS18820 are separated by 19 nucleotides ABZR86_RS18820 and ABZR86_RS18825 are separated by 130 nucleotides
ABZR86_RS18810: ABZR86_RS18810 - methyltransferase domain-containing protein, at 189,921 to 190,841
_RS18810
ABZR86_RS18815: ABZR86_RS18815 - FAD-binding protein, at 191,202 to 192,146
_RS18815
ABZR86_RS18820: ABZR86_RS18820 - electron transfer flavoprotein subunit beta/FixA family protein, at 192,166 to 192,912
_RS18820
ABZR86_RS18825: ABZR86_RS18825 - glycosyltransferase, at 193,043 to 195,124
_RS18825
Position (kb) 191
192
193 Strain fitness (log2 ratio) -1
0
1
2 at 190.219 kb on + strand, within ABZR86_RS18810 at 190.229 kb on + strand, within ABZR86_RS18810 at 190.256 kb on - strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.279 kb on + strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.280 kb on - strand, within ABZR86_RS18810 at 190.444 kb on + strand, within ABZR86_RS18810 at 190.445 kb on - strand, within ABZR86_RS18810 at 190.445 kb on - strand, within ABZR86_RS18810 at 190.543 kb on + strand, within ABZR86_RS18810 at 190.594 kb on + strand, within ABZR86_RS18810 at 190.594 kb on + strand, within ABZR86_RS18810 at 190.595 kb on - strand, within ABZR86_RS18810 at 190.595 kb on - strand, within ABZR86_RS18810 at 190.673 kb on - strand, within ABZR86_RS18810 at 190.684 kb on + strand, within ABZR86_RS18810 at 190.684 kb on + strand, within ABZR86_RS18810 at 190.723 kb on - strand, within ABZR86_RS18810 at 190.738 kb on + strand, within ABZR86_RS18810 at 190.738 kb on + strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.739 kb on - strand, within ABZR86_RS18810 at 190.765 kb on + strand at 190.765 kb on + strand at 190.765 kb on + strand at 190.765 kb on + strand at 190.766 kb on - strand at 190.766 kb on - strand at 190.768 kb on + strand at 190.768 kb on + strand at 190.769 kb on - strand at 190.775 kb on - strand at 190.934 kb on + strand at 191.034 kb on + strand at 191.076 kb on + strand at 191.085 kb on - strand at 191.374 kb on + strand, within ABZR86_RS18815 at 191.374 kb on + strand, within ABZR86_RS18815 at 191.374 kb on + strand, within ABZR86_RS18815 at 191.375 kb on - strand, within ABZR86_RS18815 at 191.375 kb on - strand, within ABZR86_RS18815 at 191.375 kb on - strand, within ABZR86_RS18815 at 191.494 kb on + strand, within ABZR86_RS18815 at 191.495 kb on - strand, within ABZR86_RS18815 at 192.150 kb on + strand at 192.150 kb on + strand at 192.167 kb on + strand at 192.167 kb on + strand at 192.168 kb on - strand at 192.168 kb on - strand at 192.966 kb on - strand at 192.966 kb on - strand at 192.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 150 mM remove 190,219 + ABZR86_RS18810 0.32 -0.4 190,229 + ABZR86_RS18810 0.33 -0.4 190,256 - ABZR86_RS18810 0.36 +0.0 190,279 + ABZR86_RS18810 0.39 +0.1 190,279 + ABZR86_RS18810 0.39 +0.3 190,279 + ABZR86_RS18810 0.39 -0.3 190,280 - ABZR86_RS18810 0.39 -0.2 190,280 - ABZR86_RS18810 0.39 +0.1 190,280 - ABZR86_RS18810 0.39 +0.0 190,444 + ABZR86_RS18810 0.57 +0.3 190,445 - ABZR86_RS18810 0.57 -0.4 190,445 - ABZR86_RS18810 0.57 -0.8 190,543 + ABZR86_RS18810 0.68 -0.3 190,594 + ABZR86_RS18810 0.73 +0.0 190,594 + ABZR86_RS18810 0.73 -0.4 190,595 - ABZR86_RS18810 0.73 +0.6 190,595 - ABZR86_RS18810 0.73 -0.1 190,673 - ABZR86_RS18810 0.82 -0.3 190,684 + ABZR86_RS18810 0.83 +0.0 190,684 + ABZR86_RS18810 0.83 -0.8 190,723 - ABZR86_RS18810 0.87 -0.8 190,738 + ABZR86_RS18810 0.89 -0.1 190,738 + ABZR86_RS18810 0.89 -0.1 190,739 - ABZR86_RS18810 0.89 -1.3 190,739 - ABZR86_RS18810 0.89 +0.1 190,739 - ABZR86_RS18810 0.89 +0.3 190,739 - ABZR86_RS18810 0.89 +0.2 190,739 - ABZR86_RS18810 0.89 +0.0 190,765 + +0.6 190,765 + -0.2 190,765 + +0.3 190,765 + -0.6 190,766 - -0.2 190,766 - +0.1 190,768 + +0.1 190,768 + +0.1 190,769 - +0.1 190,775 - -0.6 190,934 + +0.4 191,034 + -0.0 191,076 + +2.4 191,085 - +0.1 191,374 + ABZR86_RS18815 0.18 +0.2 191,374 + ABZR86_RS18815 0.18 -0.4 191,374 + ABZR86_RS18815 0.18 -1.4 191,375 - ABZR86_RS18815 0.18 -0.5 191,375 - ABZR86_RS18815 0.18 -0.4 191,375 - ABZR86_RS18815 0.18 -1.4 191,494 + ABZR86_RS18815 0.31 -0.6 191,495 - ABZR86_RS18815 0.31 +0.2 192,150 + -1.5 192,150 + -0.8 192,167 + +0.4 192,167 + +0.2 192,168 - +0.3 192,168 - +0.2 192,966 - -0.7 192,966 - -0.4 192,966 - -0.2
Or see this region's nucleotide sequence