Experiment: nitrate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18770 and ABZR86_RS18775 overlap by 14 nucleotides ABZR86_RS18775 and ABZR86_RS18780 overlap by 4 nucleotides ABZR86_RS18780 and ABZR86_RS18785 are separated by 66 nucleotides
ABZR86_RS18770: ABZR86_RS18770 - SIS domain-containing protein, at 182,851 to 183,465
_RS18770
ABZR86_RS18775: ABZR86_RS18775 - nucleotidyltransferase family protein, at 183,452 to 184,150
_RS18775
ABZR86_RS18780: ABZR86_RS18780 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 184,147 to 184,776
_RS18780
ABZR86_RS18785: ABZR86_RS18785 - class I SAM-dependent methyltransferase, at 184,843 to 185,676
_RS18785
Position (kb) 184
185 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 183.151 kb on + strand, within ABZR86_RS18770 at 183.152 kb on - strand, within ABZR86_RS18770 at 183.157 kb on + strand, within ABZR86_RS18770 at 183.157 kb on + strand, within ABZR86_RS18770 at 183.157 kb on + strand, within ABZR86_RS18770 at 183.157 kb on + strand, within ABZR86_RS18770 at 183.158 kb on - strand, within ABZR86_RS18770 at 183.158 kb on - strand, within ABZR86_RS18770 at 183.781 kb on + strand, within ABZR86_RS18775 at 183.894 kb on + strand, within ABZR86_RS18775 at 183.894 kb on + strand, within ABZR86_RS18775 at 183.894 kb on + strand, within ABZR86_RS18775 at 184.118 kb on + strand at 184.474 kb on + strand, within ABZR86_RS18780 at 184.474 kb on + strand, within ABZR86_RS18780 at 184.475 kb on - strand, within ABZR86_RS18780 at 184.477 kb on + strand, within ABZR86_RS18780 at 184.663 kb on + strand, within ABZR86_RS18780 at 184.850 kb on + strand at 184.850 kb on + strand at 184.850 kb on + strand at 184.850 kb on + strand at 184.851 kb on - strand at 184.851 kb on - strand at 184.851 kb on - strand at 184.965 kb on - strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.128 kb on + strand, within ABZR86_RS18785 at 185.129 kb on - strand, within ABZR86_RS18785 at 185.129 kb on - strand, within ABZR86_RS18785 at 185.129 kb on - strand, within ABZR86_RS18785 at 185.129 kb on - strand, within ABZR86_RS18785 at 185.155 kb on + strand, within ABZR86_RS18785 at 185.156 kb on - strand, within ABZR86_RS18785 at 185.192 kb on - strand, within ABZR86_RS18785 at 185.354 kb on + strand, within ABZR86_RS18785 at 185.355 kb on - strand, within ABZR86_RS18785 at 185.469 kb on + strand, within ABZR86_RS18785 at 185.470 kb on - strand, within ABZR86_RS18785 at 185.510 kb on - strand, within ABZR86_RS18785 at 185.548 kb on + strand, within ABZR86_RS18785 at 185.548 kb on + strand, within ABZR86_RS18785 at 185.549 kb on - strand, within ABZR86_RS18785 at 185.549 kb on - strand, within ABZR86_RS18785 at 185.549 kb on - strand, within ABZR86_RS18785 at 185.549 kb on - strand, within ABZR86_RS18785 at 185.645 kb on - strand at 185.645 kb on - strand at 185.674 kb on + strand at 185.675 kb on - strand at 185.729 kb on + strand at 185.729 kb on + strand at 185.730 kb on - strand at 185.730 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 150 mM remove 183,151 + ABZR86_RS18770 0.49 -1.7 183,152 - ABZR86_RS18770 0.49 -1.0 183,157 + ABZR86_RS18770 0.50 +0.1 183,157 + ABZR86_RS18770 0.50 -1.0 183,157 + ABZR86_RS18770 0.50 -0.5 183,157 + ABZR86_RS18770 0.50 -0.2 183,158 - ABZR86_RS18770 0.50 -1.4 183,158 - ABZR86_RS18770 0.50 -0.1 183,781 + ABZR86_RS18775 0.47 -0.8 183,894 + ABZR86_RS18775 0.63 +1.8 183,894 + ABZR86_RS18775 0.63 -2.1 183,894 + ABZR86_RS18775 0.63 -2.2 184,118 + -2.4 184,474 + ABZR86_RS18780 0.52 -2.8 184,474 + ABZR86_RS18780 0.52 -0.2 184,475 - ABZR86_RS18780 0.52 -1.0 184,477 + ABZR86_RS18780 0.52 -0.3 184,663 + ABZR86_RS18780 0.82 +0.1 184,850 + -0.3 184,850 + +0.5 184,850 + +0.1 184,850 + -2.3 184,851 - +0.3 184,851 - -0.6 184,851 - +0.5 184,965 - ABZR86_RS18785 0.15 -0.1 185,128 + ABZR86_RS18785 0.34 +0.2 185,128 + ABZR86_RS18785 0.34 +0.3 185,128 + ABZR86_RS18785 0.34 +0.1 185,128 + ABZR86_RS18785 0.34 +0.7 185,128 + ABZR86_RS18785 0.34 +0.2 185,128 + ABZR86_RS18785 0.34 +0.6 185,128 + ABZR86_RS18785 0.34 -0.3 185,128 + ABZR86_RS18785 0.34 +0.1 185,129 - ABZR86_RS18785 0.34 +0.1 185,129 - ABZR86_RS18785 0.34 +0.5 185,129 - ABZR86_RS18785 0.34 +0.6 185,129 - ABZR86_RS18785 0.34 +0.2 185,155 + ABZR86_RS18785 0.37 -1.1 185,156 - ABZR86_RS18785 0.38 +0.3 185,192 - ABZR86_RS18785 0.42 +0.0 185,354 + ABZR86_RS18785 0.61 -0.3 185,355 - ABZR86_RS18785 0.61 +0.2 185,469 + ABZR86_RS18785 0.75 +0.0 185,470 - ABZR86_RS18785 0.75 +1.0 185,510 - ABZR86_RS18785 0.80 +1.0 185,548 + ABZR86_RS18785 0.85 -0.3 185,548 + ABZR86_RS18785 0.85 -0.0 185,549 - ABZR86_RS18785 0.85 -0.3 185,549 - ABZR86_RS18785 0.85 +0.2 185,549 - ABZR86_RS18785 0.85 -0.0 185,549 - ABZR86_RS18785 0.85 -0.1 185,645 - +0.1 185,645 - +0.2 185,674 + -0.2 185,675 - +0.2 185,729 + -0.3 185,729 + +0.3 185,730 - -0.0 185,730 - +0.5
Or see this region's nucleotide sequence