Experiment: nitrate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18485 and ABZR86_RS18490 are separated by 283 nucleotides ABZR86_RS18490 and ABZR86_RS18495 overlap by 4 nucleotides
ABZR86_RS18485: ABZR86_RS18485 - fumarylacetoacetate hydrolase family protein, at 117,640 to 118,626
_RS18485
ABZR86_RS18490: ABZR86_RS18490 - low molecular weight protein-tyrosine-phosphatase, at 118,910 to 119,374
_RS18490
ABZR86_RS18495: ABZR86_RS18495 - polysaccharide biosynthesis tyrosine autokinase, at 119,371 to 121,572
_RS18495
Position (kb)
118
119
120 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 118.628 kb on - strand at 118.628 kb on - strand at 118.628 kb on - strand at 118.658 kb on + strand at 118.658 kb on + strand at 118.659 kb on - strand at 118.659 kb on - strand at 118.711 kb on - strand at 118.711 kb on - strand at 118.785 kb on - strand at 118.798 kb on - strand at 118.800 kb on + strand at 118.801 kb on - strand at 118.801 kb on - strand at 118.824 kb on + strand at 118.825 kb on - strand at 118.921 kb on + strand at 118.971 kb on - strand, within ABZR86_RS18490 at 119.010 kb on + strand, within ABZR86_RS18490 at 119.010 kb on + strand, within ABZR86_RS18490 at 119.011 kb on - strand, within ABZR86_RS18490 at 119.298 kb on - strand, within ABZR86_RS18490 at 119.336 kb on + strand at 119.337 kb on - strand at 119.527 kb on + strand at 119.527 kb on + strand at 119.694 kb on + strand, within ABZR86_RS18495 at 119.904 kb on + strand, within ABZR86_RS18495 at 119.904 kb on + strand, within ABZR86_RS18495 at 119.905 kb on - strand, within ABZR86_RS18495 at 119.905 kb on - strand, within ABZR86_RS18495 at 119.905 kb on - strand, within ABZR86_RS18495 at 119.905 kb on - strand, within ABZR86_RS18495 at 120.122 kb on - strand, within ABZR86_RS18495 at 120.178 kb on + strand, within ABZR86_RS18495 at 120.178 kb on + strand, within ABZR86_RS18495 at 120.178 kb on + strand, within ABZR86_RS18495 at 120.178 kb on + strand, within ABZR86_RS18495 at 120.178 kb on + strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495 at 120.179 kb on - strand, within ABZR86_RS18495
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 150 mM remove 118,628 - -0.2 118,628 - -0.2 118,628 - +0.6 118,658 + +0.3 118,658 + +0.2 118,659 - +0.3 118,659 - +0.3 118,711 - +0.2 118,711 - +0.3 118,785 - -1.2 118,798 - +0.3 118,800 + +0.4 118,801 - -1.1 118,801 - -2.4 118,824 + -0.5 118,825 - -2.1 118,921 + -0.5 118,971 - ABZR86_RS18490 0.13 -3.8 119,010 + ABZR86_RS18490 0.22 -3.1 119,010 + ABZR86_RS18490 0.22 -3.0 119,011 - ABZR86_RS18490 0.22 -4.8 119,298 - ABZR86_RS18490 0.83 -0.6 119,336 + -1.4 119,337 - -2.0 119,527 + -3.6 119,527 + -4.3 119,694 + ABZR86_RS18495 0.15 -2.7 119,904 + ABZR86_RS18495 0.24 -2.9 119,904 + ABZR86_RS18495 0.24 -2.6 119,905 - ABZR86_RS18495 0.24 -2.2 119,905 - ABZR86_RS18495 0.24 -1.3 119,905 - ABZR86_RS18495 0.24 -3.4 119,905 - ABZR86_RS18495 0.24 -5.1 120,122 - ABZR86_RS18495 0.34 -2.5 120,178 + ABZR86_RS18495 0.37 -3.7 120,178 + ABZR86_RS18495 0.37 -2.6 120,178 + ABZR86_RS18495 0.37 -3.3 120,178 + ABZR86_RS18495 0.37 -3.7 120,178 + ABZR86_RS18495 0.37 -1.5 120,179 - ABZR86_RS18495 0.37 -3.1 120,179 - ABZR86_RS18495 0.37 -2.5 120,179 - ABZR86_RS18495 0.37 -2.3 120,179 - ABZR86_RS18495 0.37 -2.9 120,179 - ABZR86_RS18495 0.37 -2.0 120,179 - ABZR86_RS18495 0.37 -3.4 120,179 - ABZR86_RS18495 0.37 -2.6 120,179 - ABZR86_RS18495 0.37 -0.9
Or see this region's nucleotide sequence