Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17480

Experiment: nitrate 150 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 150 mM
3,947,968	+				-0.2
3,947,968	+				+0.9
3,947,968	+				+0.5
3,947,968	+				+0.5
3,947,968	+				+0.6
3,947,968	+				+0.3
3,947,968	+				-0.1
3,947,968	+				+0.4
3,947,969	-				+0.2
3,947,969	-				+0.4
3,947,969	-				+0.0
3,947,969	-				+0.4
3,947,969	-				-0.1
3,947,969	-				+0.3
3,947,969	-				+0.5
3,948,003	+				-0.1
3,948,004	-				+1.0
3,948,004	-				-0.3
3,948,270	+		ABZR86_RS17480	0.26	-0.7
3,948,305	-		ABZR86_RS17480	0.29	-4.1
3,948,305	-		ABZR86_RS17480	0.29	-2.6
3,948,305	-		ABZR86_RS17480	0.29	-3.1
3,948,347	-		ABZR86_RS17480	0.33	-2.4
3,948,347	-		ABZR86_RS17480	0.33	-4.5
3,948,347	-		ABZR86_RS17480	0.33	-3.2
3,948,364	+		ABZR86_RS17480	0.35	-1.0
3,948,364	+		ABZR86_RS17480	0.35	-1.7
3,948,365	-		ABZR86_RS17480	0.35	-0.6
3,948,365	-		ABZR86_RS17480	0.35	-2.0
3,948,365	-		ABZR86_RS17480	0.35	-1.3
3,948,365	-		ABZR86_RS17480	0.35	-1.9
3,948,365	-		ABZR86_RS17480	0.35	-3.0
3,948,397	+		ABZR86_RS17480	0.38	-0.5
3,948,397	+		ABZR86_RS17480	0.38	-2.5
3,948,397	+		ABZR86_RS17480	0.38	-0.9
3,948,397	+		ABZR86_RS17480	0.38	-1.3
3,948,418	+		ABZR86_RS17480	0.40	-1.2
3,948,418	+		ABZR86_RS17480	0.40	-1.1
3,948,418	+		ABZR86_RS17480	0.40	+0.1
3,948,419	-		ABZR86_RS17480	0.40	-2.3
3,948,419	-		ABZR86_RS17480	0.40	-3.4
3,948,419	-		ABZR86_RS17480	0.40	-1.6
3,948,419	-		ABZR86_RS17480	0.40	-3.8
3,948,419	-		ABZR86_RS17480	0.40	-2.2
3,948,454	+		ABZR86_RS17480	0.44	-0.9
3,948,454	+		ABZR86_RS17480	0.44	-0.6
3,948,457	+		ABZR86_RS17480	0.44	-0.9
3,948,458	-		ABZR86_RS17480	0.44	-4.5
3,948,458	-		ABZR86_RS17480	0.44	-3.7
3,948,458	-		ABZR86_RS17480	0.44	-2.0
3,948,686	-		ABZR86_RS17480	0.67	-2.9
3,948,686	-		ABZR86_RS17480	0.67	-1.9
3,948,686	-		ABZR86_RS17480	0.67	-1.0
3,948,686	-		ABZR86_RS17480	0.67	-0.6
3,948,818	-		ABZR86_RS17480	0.80	-1.4
3,948,893	-		ABZR86_RS17480	0.87	-0.8
3,948,916	+		ABZR86_RS17480	0.90	-0.9
3,948,917	-		ABZR86_RS17480	0.90	-2.2
3,948,917	-		ABZR86_RS17480	0.90	-0.8
3,948,931	+				-0.0
3,948,931	+				-2.1
3,948,931	+				-0.2
3,948,931	+				+0.6
3,948,931	+				-0.9
3,948,931	+				-2.9
3,948,932	-				-1.8
3,948,932	-				-0.3
3,948,932	-				-1.7
3,948,950	-				-1.4
3,949,114	-		ABZR86_RS17485	0.10	-4.0
3,949,114	-		ABZR86_RS17485	0.10	-4.8
3,949,115	+		ABZR86_RS17485	0.10	-3.1
3,949,115	+		ABZR86_RS17485	0.10	-3.4
3,949,116	-		ABZR86_RS17485	0.10	-2.7
3,949,116	-		ABZR86_RS17485	0.10	-3.9
3,949,146	+		ABZR86_RS17485	0.13	-3.2
3,949,146	+		ABZR86_RS17485	0.13	-2.8
3,949,147	-		ABZR86_RS17485	0.13	-4.6
3,949,311	+		ABZR86_RS17485	0.30	-4.3
3,949,312	-		ABZR86_RS17485	0.31	-3.4
3,949,312	-		ABZR86_RS17485	0.31	-4.2
3,949,329	+		ABZR86_RS17485	0.32	-1.7
3,949,329	+		ABZR86_RS17485	0.32	-3.3
3,949,329	+		ABZR86_RS17485	0.32	-2.5
3,949,329	+		ABZR86_RS17485	0.32	-2.6
3,949,330	-		ABZR86_RS17485	0.32	-2.3
3,949,330	-		ABZR86_RS17485	0.32	-4.0
3,949,350	+		ABZR86_RS17485	0.34	-1.0
3,949,350	+		ABZR86_RS17485	0.34	-2.1
3,949,350	+		ABZR86_RS17485	0.34	-2.1
3,949,350	+		ABZR86_RS17485	0.34	-2.1
3,949,350	+		ABZR86_RS17485	0.34	-2.5
3,949,351	-		ABZR86_RS17485	0.35	-2.4
3,949,351	-		ABZR86_RS17485	0.35	-3.8
3,949,351	-		ABZR86_RS17485	0.35	-3.1
3,949,351	-		ABZR86_RS17485	0.35	-4.6
3,949,377	+		ABZR86_RS17485	0.37	-3.1
3,949,377	+		ABZR86_RS17485	0.37	-3.6
3,949,377	+		ABZR86_RS17485	0.37	-3.2
3,949,377	+		ABZR86_RS17485	0.37	-2.3
3,949,377	+		ABZR86_RS17485	0.37	-2.0
3,949,378	-		ABZR86_RS17485	0.37	-3.1
3,949,378	-		ABZR86_RS17485	0.37	-2.5
3,949,378	-		ABZR86_RS17485	0.37	-2.2
3,949,378	-		ABZR86_RS17485	0.37	-2.9
3,949,404	+		ABZR86_RS17485	0.40	-0.3
3,949,404	+		ABZR86_RS17485	0.40	-1.2
3,949,405	-		ABZR86_RS17485	0.40	-2.0
3,949,405	-		ABZR86_RS17485	0.40	-3.3
3,949,405	-		ABZR86_RS17485	0.40	-2.8
3,949,405	-		ABZR86_RS17485	0.40	-1.6
3,949,405	-		ABZR86_RS17485	0.40	-2.3
3,949,425	+		ABZR86_RS17485	0.42	-3.5
3,949,425	+		ABZR86_RS17485	0.42	-1.9
3,949,425	+		ABZR86_RS17485	0.42	-3.1
3,949,449	+		ABZR86_RS17485	0.45	-3.5
3,949,449	+		ABZR86_RS17485	0.45	-1.3
3,949,458	+		ABZR86_RS17485	0.46	-3.1
3,949,458	+		ABZR86_RS17485	0.46	-2.9
3,949,458	+		ABZR86_RS17485	0.46	-3.0
3,949,458	+		ABZR86_RS17485	0.46	-3.7
3,949,458	+		ABZR86_RS17485	0.46	-1.7
3,949,458	+		ABZR86_RS17485	0.46	-3.7
3,949,458	+		ABZR86_RS17485	0.46	-1.6
3,949,458	+		ABZR86_RS17485	0.46	-3.1
3,949,458	+		ABZR86_RS17485	0.46	-2.5
3,949,458	+		ABZR86_RS17485	0.46	-3.8
3,949,458	+		ABZR86_RS17485	0.46	-2.5
3,949,459	-		ABZR86_RS17485	0.46	-2.2
3,949,459	-		ABZR86_RS17485	0.46	-2.1
3,949,459	-		ABZR86_RS17485	0.46	-4.1
3,949,459	-		ABZR86_RS17485	0.46	-2.4
3,949,459	-		ABZR86_RS17485	0.46	-2.3
3,949,500	+		ABZR86_RS17485	0.50	-3.9
3,949,500	+		ABZR86_RS17485	0.50	-1.3
3,949,501	-		ABZR86_RS17485	0.50	-2.3
3,949,596	+		ABZR86_RS17485	0.60	-1.5
3,949,596	+		ABZR86_RS17485	0.60	-3.0
3,949,597	-		ABZR86_RS17485	0.60	-2.4
3,949,597	-		ABZR86_RS17485	0.60	-3.7
3,949,623	+		ABZR86_RS17485	0.63	+0.1
3,949,758	+		ABZR86_RS17485	0.77	+1.0
3,949,758	+		ABZR86_RS17485	0.77	-0.2
3,949,758	+		ABZR86_RS17485	0.77	-0.5
3,949,758	+		ABZR86_RS17485	0.77	-0.4
3,949,758	+		ABZR86_RS17485	0.77	+0.0
3,949,758	+		ABZR86_RS17485	0.77	-0.8
3,949,758	+		ABZR86_RS17485	0.77	+0.3
3,949,759	-		ABZR86_RS17485	0.77	-0.3
3,949,759	-		ABZR86_RS17485	0.77	+0.3
3,949,759	-		ABZR86_RS17485	0.77	+0.8
3,949,759	-		ABZR86_RS17485	0.77	+0.5
3,949,759	-		ABZR86_RS17485	0.77	+1.4
3,949,759	-		ABZR86_RS17485	0.77	-0.2
3,949,891	+				+0.6