Experiment: nitrate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17070 and ABZR86_RS17075 are separated by 34 nucleotides ABZR86_RS17075 and ABZR86_RS17080 are separated by 17 nucleotides ABZR86_RS17080 and ABZR86_RS17085 are separated by 63 nucleotides
ABZR86_RS17070: ABZR86_RS17070 - acetyl-CoA carboxylase biotin carboxylase subunit, at 3,857,150 to 3,858,526
_RS17070
ABZR86_RS17075: ABZR86_RS17075 - four helix bundle protein, at 3,858,561 to 3,858,944
_RS17075
ABZR86_RS17080: ABZR86_RS17080 - acetyl-CoA carboxylase biotin carboxyl carrier protein, at 3,858,962 to 3,859,420
_RS17080
ABZR86_RS17085: ABZR86_RS17085 - type II 3-dehydroquinate dehydratase, at 3,859,484 to 3,859,933
_RS17085
Position (kb)
3858
3859 Strain fitness (log2 ratio)
-2
-1
0
1 at 3858.533 kb on - strand at 3858.533 kb on - strand at 3858.554 kb on - strand at 3858.554 kb on - strand at 3858.554 kb on - strand at 3858.630 kb on - strand, within ABZR86_RS17075 at 3858.630 kb on - strand, within ABZR86_RS17075 at 3858.630 kb on - strand, within ABZR86_RS17075 at 3858.674 kb on - strand, within ABZR86_RS17075 at 3858.674 kb on - strand, within ABZR86_RS17075 at 3858.777 kb on - strand, within ABZR86_RS17075 at 3858.808 kb on - strand, within ABZR86_RS17075 at 3858.808 kb on - strand, within ABZR86_RS17075 at 3858.863 kb on - strand, within ABZR86_RS17075 at 3858.863 kb on - strand, within ABZR86_RS17075 at 3858.936 kb on - strand at 3858.950 kb on - strand at 3858.950 kb on - strand at 3859.588 kb on - strand, within ABZR86_RS17085 at 3859.588 kb on - strand, within ABZR86_RS17085 at 3859.588 kb on - strand, within ABZR86_RS17085 at 3859.588 kb on - strand, within ABZR86_RS17085 at 3859.588 kb on - strand, within ABZR86_RS17085 at 3859.588 kb on - strand, within ABZR86_RS17085 at 3859.588 kb on - strand, within ABZR86_RS17085 at 3859.789 kb on - strand, within ABZR86_RS17085 at 3859.789 kb on - strand, within ABZR86_RS17085 at 3859.867 kb on - strand, within ABZR86_RS17085 at 3859.867 kb on - strand, within ABZR86_RS17085
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 150 mM remove 3,858,533 - -0.0 3,858,533 - -0.6 3,858,554 - +0.1 3,858,554 - -0.1 3,858,554 - -0.2 3,858,630 - ABZR86_RS17075 0.18 -0.3 3,858,630 - ABZR86_RS17075 0.18 -0.6 3,858,630 - ABZR86_RS17075 0.18 -2.0 3,858,674 - ABZR86_RS17075 0.29 -1.2 3,858,674 - ABZR86_RS17075 0.29 -0.6 3,858,777 - ABZR86_RS17075 0.56 -1.8 3,858,808 - ABZR86_RS17075 0.64 -2.6 3,858,808 - ABZR86_RS17075 0.64 -0.5 3,858,863 - ABZR86_RS17075 0.79 -1.3 3,858,863 - ABZR86_RS17075 0.79 -0.0 3,858,936 - +0.1 3,858,950 - -1.3 3,858,950 - -1.6 3,859,588 - ABZR86_RS17085 0.23 +0.2 3,859,588 - ABZR86_RS17085 0.23 +0.6 3,859,588 - ABZR86_RS17085 0.23 +0.0 3,859,588 - ABZR86_RS17085 0.23 -1.0 3,859,588 - ABZR86_RS17085 0.23 -0.6 3,859,588 - ABZR86_RS17085 0.23 -0.1 3,859,588 - ABZR86_RS17085 0.23 +0.0 3,859,789 - ABZR86_RS17085 0.68 +0.3 3,859,789 - ABZR86_RS17085 0.68 +0.3 3,859,867 - ABZR86_RS17085 0.85 +0.6 3,859,867 - ABZR86_RS17085 0.85 -0.7
Or see this region's nucleotide sequence