Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17075

Experiment: nitrate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17070 and ABZR86_RS17075 are separated by 34 nucleotidesABZR86_RS17075 and ABZR86_RS17080 are separated by 17 nucleotidesABZR86_RS17080 and ABZR86_RS17085 are separated by 63 nucleotides ABZR86_RS17070: ABZR86_RS17070 - acetyl-CoA carboxylase biotin carboxylase subunit, at 3,857,150 to 3,858,526 _RS17070 ABZR86_RS17075: ABZR86_RS17075 - four helix bundle protein, at 3,858,561 to 3,858,944 _RS17075 ABZR86_RS17080: ABZR86_RS17080 - acetyl-CoA carboxylase biotin carboxyl carrier protein, at 3,858,962 to 3,859,420 _RS17080 ABZR86_RS17085: ABZR86_RS17085 - type II 3-dehydroquinate dehydratase, at 3,859,484 to 3,859,933 _RS17085 Position (kb) 3858 3859Strain fitness (log2 ratio) -2 -1 0 1at 3858.533 kb on - strandat 3858.533 kb on - strandat 3858.554 kb on - strandat 3858.554 kb on - strandat 3858.554 kb on - strandat 3858.630 kb on - strand, within ABZR86_RS17075at 3858.630 kb on - strand, within ABZR86_RS17075at 3858.630 kb on - strand, within ABZR86_RS17075at 3858.674 kb on - strand, within ABZR86_RS17075at 3858.674 kb on - strand, within ABZR86_RS17075at 3858.777 kb on - strand, within ABZR86_RS17075at 3858.808 kb on - strand, within ABZR86_RS17075at 3858.808 kb on - strand, within ABZR86_RS17075at 3858.863 kb on - strand, within ABZR86_RS17075at 3858.863 kb on - strand, within ABZR86_RS17075at 3858.936 kb on - strandat 3858.950 kb on - strandat 3858.950 kb on - strandat 3859.588 kb on - strand, within ABZR86_RS17085at 3859.588 kb on - strand, within ABZR86_RS17085at 3859.588 kb on - strand, within ABZR86_RS17085at 3859.588 kb on - strand, within ABZR86_RS17085at 3859.588 kb on - strand, within ABZR86_RS17085at 3859.588 kb on - strand, within ABZR86_RS17085at 3859.588 kb on - strand, within ABZR86_RS17085at 3859.789 kb on - strand, within ABZR86_RS17085at 3859.789 kb on - strand, within ABZR86_RS17085at 3859.867 kb on - strand, within ABZR86_RS17085at 3859.867 kb on - strand, within ABZR86_RS17085

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Per-strain Table

Position Strand Gene LocusTag Fraction nitrate 150 mM
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3,858,533 - -0.0
3,858,533 - -0.6
3,858,554 - +0.1
3,858,554 - -0.1
3,858,554 - -0.2
3,858,630 - ABZR86_RS17075 0.18 -0.3
3,858,630 - ABZR86_RS17075 0.18 -0.6
3,858,630 - ABZR86_RS17075 0.18 -2.0
3,858,674 - ABZR86_RS17075 0.29 -1.2
3,858,674 - ABZR86_RS17075 0.29 -0.6
3,858,777 - ABZR86_RS17075 0.56 -1.8
3,858,808 - ABZR86_RS17075 0.64 -2.6
3,858,808 - ABZR86_RS17075 0.64 -0.5
3,858,863 - ABZR86_RS17075 0.79 -1.3
3,858,863 - ABZR86_RS17075 0.79 -0.0
3,858,936 - +0.1
3,858,950 - -1.3
3,858,950 - -1.6
3,859,588 - ABZR86_RS17085 0.23 +0.2
3,859,588 - ABZR86_RS17085 0.23 +0.6
3,859,588 - ABZR86_RS17085 0.23 +0.0
3,859,588 - ABZR86_RS17085 0.23 -1.0
3,859,588 - ABZR86_RS17085 0.23 -0.6
3,859,588 - ABZR86_RS17085 0.23 -0.1
3,859,588 - ABZR86_RS17085 0.23 +0.0
3,859,789 - ABZR86_RS17085 0.68 +0.3
3,859,789 - ABZR86_RS17085 0.68 +0.3
3,859,867 - ABZR86_RS17085 0.85 +0.6
3,859,867 - ABZR86_RS17085 0.85 -0.7

Or see this region's nucleotide sequence