Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15665

Experiment: nitrate 150 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 150 mM
3,523,035	-		ABZR86_RS15655	0.59	-0.7
3,523,035	-		ABZR86_RS15655	0.59	-1.3
3,523,078	+		ABZR86_RS15655	0.63	-0.8
3,523,078	+		ABZR86_RS15655	0.63	-0.3
3,523,078	+		ABZR86_RS15655	0.63	-1.0
3,523,079	-		ABZR86_RS15655	0.63	-0.9
3,523,079	-		ABZR86_RS15655	0.63	-0.2
3,523,079	-		ABZR86_RS15655	0.63	-0.7
3,523,086	-		ABZR86_RS15655	0.63	-0.3
3,523,086	-		ABZR86_RS15655	0.63	-1.0
3,523,086	-		ABZR86_RS15655	0.63	-0.4
3,523,086	-		ABZR86_RS15655	0.63	-0.6
3,523,202	+		ABZR86_RS15655	0.73	-0.8
3,523,202	+		ABZR86_RS15655	0.73	+0.3
3,523,202	+		ABZR86_RS15655	0.73	-0.9
3,523,203	-		ABZR86_RS15655	0.73	-0.5
3,523,203	-		ABZR86_RS15655	0.73	-0.1
3,523,220	+		ABZR86_RS15655	0.74	-0.2
3,523,220	+		ABZR86_RS15655	0.74	-1.3
3,523,220	+		ABZR86_RS15655	0.74	-1.4
3,523,220	+		ABZR86_RS15655	0.74	-0.7
3,523,220	+		ABZR86_RS15655	0.74	+0.4
3,523,221	-		ABZR86_RS15655	0.74	-1.2
3,523,221	-		ABZR86_RS15655	0.74	-1.0
3,523,221	-		ABZR86_RS15655	0.74	-0.8
3,523,221	-		ABZR86_RS15655	0.74	-1.0
3,523,276	-		ABZR86_RS15655	0.79	-0.7
3,523,276	-		ABZR86_RS15655	0.79	-0.3
3,523,276	-		ABZR86_RS15655	0.79	+0.4
3,523,346	+		ABZR86_RS15655	0.84	-0.9
3,523,347	-		ABZR86_RS15655	0.84	-0.8
3,523,347	-		ABZR86_RS15655	0.84	+0.5
3,523,347	-		ABZR86_RS15655	0.84	+1.4
3,523,436	+				-1.1
3,523,436	+				+0.2
3,523,436	+				+1.7
3,523,436	+				-0.8
3,523,436	+				-1.1
3,523,436	+				-0.8
3,523,436	+				-1.3
3,523,436	+				-0.6
3,523,437	-				-0.2
3,523,437	-				-1.3
3,523,437	-				-1.2
3,523,437	-				-0.7
3,523,437	-				-0.9
3,523,437	-				-0.6
3,523,437	-				-0.9
3,523,487	+				-0.9
3,523,488	-				+0.1
3,523,488	-				-0.5
3,523,488	-				-0.5
3,523,488	-				-0.8
3,523,682	+				-0.6
3,523,682	+				+0.5
3,523,683	-				+0.3
3,523,713	+				+0.0
3,523,713	+				+1.1
3,523,713	+				-0.0
3,523,713	+				+0.9
3,523,714	-				-0.2
3,523,714	-				-0.1
3,523,714	-				+0.1
3,523,714	-				+0.7
3,523,714	-				-0.4
3,523,714	-				+0.2
3,524,026	+				-0.7
3,524,027	-				-0.3
3,524,027	-				+0.2
3,524,223	-		ABZR86_RS15665	0.19	-0.8
3,524,425	+		ABZR86_RS15665	0.37	-0.7
3,524,426	+		ABZR86_RS15665	0.37	-0.9
3,524,426	-		ABZR86_RS15665	0.37	-0.1
3,524,500	+		ABZR86_RS15665	0.44	-0.9
3,524,500	+		ABZR86_RS15665	0.44	-0.3
3,524,500	+		ABZR86_RS15665	0.44	-0.5
3,524,501	-		ABZR86_RS15665	0.44	-0.5
3,524,501	-		ABZR86_RS15665	0.44	-0.6
3,524,501	-		ABZR86_RS15665	0.44	-0.1
3,524,501	-		ABZR86_RS15665	0.44	-2.3
3,524,625	+		ABZR86_RS15665	0.55	-0.5
3,524,626	-		ABZR86_RS15665	0.55	-1.5
3,524,626	-		ABZR86_RS15665	0.55	+0.1
3,524,936	-		ABZR86_RS15665	0.83	-0.6
3,525,104	+				-0.5
3,525,104	+				-0.6
3,525,104	+				-1.1
3,525,104	+				-0.8
3,525,105	-				+0.4
3,525,106	+				-0.2
3,525,106	+				+0.1
3,525,106	+				+0.7
3,525,106	+				+0.3
3,525,106	+				-0.5
3,525,106	+				-0.7
3,525,106	+				-0.0
3,525,106	+				-1.8
3,525,106	+				-0.6
3,525,107	-				-0.6
3,525,107	-				-0.6
3,525,107	-				+0.8
3,525,107	-				+0.1
3,525,107	-				+0.3
3,525,107	-				-0.7
3,525,107	-				-0.9
3,525,107	-				-1.6
3,525,127	+				-0.0
3,525,332	+		ABZR86_RS15670	0.13	-2.0
3,525,333	-		ABZR86_RS15670	0.13	-3.7
3,525,333	-		ABZR86_RS15670	0.13	-2.4
3,525,333	-		ABZR86_RS15670	0.13	-0.7
3,525,333	-		ABZR86_RS15670	0.13	-1.7
3,525,333	-		ABZR86_RS15670	0.13	-4.2
3,525,374	+		ABZR86_RS15670	0.16	-2.2
3,525,374	+		ABZR86_RS15670	0.16	-2.4
3,525,374	+		ABZR86_RS15670	0.16	-1.3
3,525,374	+		ABZR86_RS15670	0.16	-0.4
3,525,374	+		ABZR86_RS15670	0.16	-3.1
3,525,374	+		ABZR86_RS15670	0.16	-1.0
3,525,444	-		ABZR86_RS15670	0.21	-2.4
3,525,444	-		ABZR86_RS15670	0.21	-1.8
3,525,566	+		ABZR86_RS15670	0.29	-1.5
3,525,567	-		ABZR86_RS15670	0.29	-1.6
3,525,567	-		ABZR86_RS15670	0.29	-2.1
3,525,710	+		ABZR86_RS15670	0.39	-1.5
3,525,710	+		ABZR86_RS15670	0.39	-1.8
3,525,711	-		ABZR86_RS15670	0.39	-1.4
3,525,711	-		ABZR86_RS15670	0.39	-1.5
3,525,711	-		ABZR86_RS15670	0.39	-1.2
3,525,711	-		ABZR86_RS15670	0.39	-1.6
3,525,711	-		ABZR86_RS15670	0.39	-0.7
3,525,711	-		ABZR86_RS15670	0.39	-2.5
3,525,737	+		ABZR86_RS15670	0.41	-1.2
3,525,737	+		ABZR86_RS15670	0.41	-2.6
3,525,737	+		ABZR86_RS15670	0.41	-3.1
3,525,738	-		ABZR86_RS15670	0.41	-1.7
3,525,738	-		ABZR86_RS15670	0.41	-0.4
3,525,738	-		ABZR86_RS15670	0.41	-2.3
3,525,738	-		ABZR86_RS15670	0.41	-1.1
3,525,738	-		ABZR86_RS15670	0.41	-1.7
3,525,746	+		ABZR86_RS15670	0.42	-2.1
3,525,747	-		ABZR86_RS15670	0.42	-1.1
3,525,800	+		ABZR86_RS15670	0.46	-2.1
3,525,801	-		ABZR86_RS15670	0.46	-3.0
3,525,801	-		ABZR86_RS15670	0.46	-2.3
3,525,815	+		ABZR86_RS15670	0.47	-1.7
3,525,815	+		ABZR86_RS15670	0.47	-0.5
3,525,815	+		ABZR86_RS15670	0.47	-2.7
3,525,816	-		ABZR86_RS15670	0.47	-1.0
3,525,816	-		ABZR86_RS15670	0.47	-2.2
3,525,827	+		ABZR86_RS15670	0.47	-1.8
3,525,827	+		ABZR86_RS15670	0.47	-2.5
3,525,827	+		ABZR86_RS15670	0.47	-0.9
3,525,827	+		ABZR86_RS15670	0.47	-1.8
3,525,828	-		ABZR86_RS15670	0.48	-2.3
3,525,828	-		ABZR86_RS15670	0.48	-0.3
3,525,828	-		ABZR86_RS15670	0.48	-0.8
3,525,828	-		ABZR86_RS15670	0.48	-1.6
3,525,828	-		ABZR86_RS15670	0.48	-1.4
3,525,828	-		ABZR86_RS15670	0.48	-2.3
3,525,881	+		ABZR86_RS15670	0.51	-2.6
3,525,881	+		ABZR86_RS15670	0.51	-1.4
3,525,881	+		ABZR86_RS15670	0.51	-3.6
3,525,881	+		ABZR86_RS15670	0.51	-2.1
3,525,881	+		ABZR86_RS15670	0.51	-2.2
3,525,881	+		ABZR86_RS15670	0.51	-2.5
3,525,881	+		ABZR86_RS15670	0.51	-2.8
3,525,882	-		ABZR86_RS15670	0.51	-3.2
3,525,882	-		ABZR86_RS15670	0.51	-2.2
3,525,882	-		ABZR86_RS15670	0.51	-0.0
3,525,882	-		ABZR86_RS15670	0.51	-1.7
3,525,882	-		ABZR86_RS15670	0.51	-0.1
3,525,882	-		ABZR86_RS15670	0.51	-1.2
3,525,882	-		ABZR86_RS15670	0.51	-1.8