Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12450

Experiment: nitrate 150 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 150 mM
2,777,716	-		ABZR86_RS12445	0.22	+0.4
2,777,716	-		ABZR86_RS12445	0.22	+1.1
2,777,762	+		ABZR86_RS12445	0.27	+0.4
2,777,762	+		ABZR86_RS12445	0.27	+0.1
2,777,762	+		ABZR86_RS12445	0.27	+0.4
2,777,762	+		ABZR86_RS12445	0.27	-0.3
2,777,762	+		ABZR86_RS12445	0.27	-0.5
2,777,762	+		ABZR86_RS12445	0.27	+0.2
2,777,762	+		ABZR86_RS12445	0.27	+0.5
2,777,762	+		ABZR86_RS12445	0.27	-0.0
2,777,762	+		ABZR86_RS12445	0.27	+0.3
2,777,762	+		ABZR86_RS12445	0.27	-0.0
2,777,762	+		ABZR86_RS12445	0.27	-0.1
2,777,763	-		ABZR86_RS12445	0.27	+0.2
2,777,763	-		ABZR86_RS12445	0.27	+0.4
2,777,763	-		ABZR86_RS12445	0.27	+0.0
2,777,763	-		ABZR86_RS12445	0.27	-0.4
2,777,763	-		ABZR86_RS12445	0.27	+0.3
2,777,763	-		ABZR86_RS12445	0.27	+0.5
2,778,011	+		ABZR86_RS12445	0.56	+0.0
2,778,062	+		ABZR86_RS12445	0.62	+0.5
2,778,062	+		ABZR86_RS12445	0.62	+0.6
2,778,062	+		ABZR86_RS12445	0.62	-0.5
2,778,062	+		ABZR86_RS12445	0.62	+0.5
2,778,062	+		ABZR86_RS12445	0.62	+0.7
2,778,062	+		ABZR86_RS12445	0.62	+0.7
2,778,063	-		ABZR86_RS12445	0.62	-0.1
2,778,063	-		ABZR86_RS12445	0.62	-0.7
2,778,063	-		ABZR86_RS12445	0.62	-0.5
2,778,063	-		ABZR86_RS12445	0.62	+0.2
2,778,063	-		ABZR86_RS12445	0.62	+0.2
2,778,064	+		ABZR86_RS12445	0.62	+0.3
2,778,075	-		ABZR86_RS12445	0.64	-0.4
2,778,124	+		ABZR86_RS12445	0.69	+1.0
2,778,124	+		ABZR86_RS12445	0.69	-0.0
2,778,124	+		ABZR86_RS12445	0.69	+0.0
2,778,124	+		ABZR86_RS12445	0.69	-0.4
2,778,124	+		ABZR86_RS12445	0.69	+0.5
2,778,124	+		ABZR86_RS12445	0.69	+0.3
2,778,125	-		ABZR86_RS12445	0.70	+0.3
2,778,125	-		ABZR86_RS12445	0.70	-0.1
2,778,125	-		ABZR86_RS12445	0.70	+0.4
2,778,125	-		ABZR86_RS12445	0.70	+0.2
2,778,125	-		ABZR86_RS12445	0.70	+0.2
2,778,125	-		ABZR86_RS12445	0.70	-0.4
2,778,125	-		ABZR86_RS12445	0.70	-0.1
2,778,125	-		ABZR86_RS12445	0.70	-0.1
2,778,125	-		ABZR86_RS12445	0.70	+0.4
2,778,125	-		ABZR86_RS12445	0.70	-0.1
2,778,176	+		ABZR86_RS12445	0.76	-0.1
2,778,176	+		ABZR86_RS12445	0.76	-0.2
2,778,176	+		ABZR86_RS12445	0.76	-0.5
2,778,176	+		ABZR86_RS12445	0.76	+0.3
2,778,177	-		ABZR86_RS12445	0.76	+0.6
2,778,177	-		ABZR86_RS12445	0.76	-1.1
2,778,177	-		ABZR86_RS12445	0.76	+0.3
2,778,177	-		ABZR86_RS12445	0.76	-0.1
2,778,563	+				+0.1
2,778,654	+				+1.3
2,778,654	+				+0.4
2,778,655	-				-0.3
2,778,655	-				-0.6
2,778,666	+				+0.0
2,778,666	+				+0.2
2,778,667	-				+0.5
2,778,667	-				+0.6
2,778,667	-				-0.2
2,778,845	+		ABZR86_RS12450	0.16	-0.7
2,778,846	-		ABZR86_RS12450	0.16	-0.1
2,778,846	-		ABZR86_RS12450	0.16	+0.1
2,778,846	-		ABZR86_RS12450	0.16	-1.1
2,778,899	+		ABZR86_RS12450	0.22	-0.9
2,778,929	+		ABZR86_RS12450	0.25	+0.5
2,778,929	+		ABZR86_RS12450	0.25	-1.4
2,778,929	+		ABZR86_RS12450	0.25	-1.4
2,778,929	+		ABZR86_RS12450	0.25	-0.5
2,778,929	+		ABZR86_RS12450	0.25	-1.5
2,778,930	-		ABZR86_RS12450	0.25	-0.9
2,778,930	-		ABZR86_RS12450	0.25	-0.2
2,778,930	-		ABZR86_RS12450	0.25	-0.4
2,778,930	-		ABZR86_RS12450	0.25	-1.9
2,778,977	+		ABZR86_RS12450	0.30	-0.2
2,778,977	+		ABZR86_RS12450	0.30	-0.3
2,778,977	+		ABZR86_RS12450	0.30	-1.2
2,778,977	+		ABZR86_RS12450	0.30	-0.9
2,778,977	+		ABZR86_RS12450	0.30	-1.4
2,778,977	+		ABZR86_RS12450	0.30	-0.9
2,778,977	+		ABZR86_RS12450	0.30	-1.0
2,778,977	+		ABZR86_RS12450	0.30	-0.6
2,778,978	-		ABZR86_RS12450	0.30	+1.3
2,778,978	-		ABZR86_RS12450	0.30	-0.6
2,779,443	-		ABZR86_RS12450	0.81	-0.5
2,779,556	+				-0.0
2,779,556	+				-0.0
2,779,556	+				-1.1
2,779,556	+				-1.5
2,779,557	-				-0.8
2,779,557	-				-0.4
2,779,557	-				-1.1
2,779,557	-				+1.1
2,779,557	-				-0.6
2,779,557	-				-1.0
2,779,557	-				-0.3
2,779,726	+				-0.6
2,779,814	+				-1.0
2,779,814	+				+1.1
2,779,815	-				+0.6
2,779,827	+				-0.4
2,779,827	+				-1.1
2,779,827	+				+0.8
2,779,827	+				+0.5
2,779,838	-				+0.4
2,779,846	+				+0.2
2,779,846	+				-0.2
2,779,846	+				-0.3
2,779,847	-				-0.3
2,779,847	-				+0.5
2,779,847	-				-0.1
2,779,847	-				+0.1
2,779,847	-				+1.9
2,779,847	-				+0.3
2,779,847	-				+0.5
2,779,847	-				+0.2
2,779,847	-				+0.1
2,779,876	-				+0.2
2,779,905	+				+0.1
2,779,906	-				-0.1
2,779,906	-				+1.1
2,779,937	+				+0.1
2,779,938	-				+0.7
2,779,955	+				+0.7
2,779,955	+				-0.4
2,779,955	+				+0.5
2,779,955	+				+0.4
2,779,955	+				-0.8
2,779,956	-				-0.7
2,779,956	-				+0.2
2,779,956	-				-0.5
2,779,966	+				-0.2
2,779,974	+				+0.1
2,779,974	+				+0.1
2,779,974	+				+0.6
2,779,975	-				-0.5
2,779,975	-				+0.3
2,780,039	+				-0.3
2,780,039	+				-0.3
2,780,039	+				-0.1
2,780,039	+				+0.1
2,780,039	+				-0.1
2,780,039	+				+0.1
2,780,040	-				+0.1
2,780,040	-				+0.9
2,780,040	-				-0.4
2,780,040	-				+0.5
2,780,047	-				-0.0
2,780,047	-				-0.0
2,780,047	-				+0.3
2,780,047	-				-0.0
2,780,047	-				+0.5
2,780,047	-				+0.3
2,780,425	+				+0.1
2,780,425	+				-0.0
2,780,425	+				+0.0
2,780,425	+				+0.3
2,780,426	-				+0.8
2,780,426	-				-1.0
2,780,426	-				+0.2
2,780,426	-				-0.9
2,780,570	+		ABZR86_RS12455	0.13	-0.0
2,780,570	+		ABZR86_RS12455	0.13	+0.3
2,780,570	+		ABZR86_RS12455	0.13	-0.0
2,780,570	+		ABZR86_RS12455	0.13	+0.2
2,780,570	+		ABZR86_RS12455	0.13	+0.0
2,780,571	-		ABZR86_RS12455	0.13	+0.3
2,780,571	-		ABZR86_RS12455	0.13	+0.3
2,780,571	-		ABZR86_RS12455	0.13	+0.5
2,780,571	-		ABZR86_RS12455	0.13	-0.2
2,780,571	-		ABZR86_RS12455	0.13	+1.8
2,780,571	-		ABZR86_RS12455	0.13	+0.4
2,780,571	-		ABZR86_RS12455	0.13	+0.9
2,780,571	-		ABZR86_RS12455	0.13	+0.1
2,780,571	-		ABZR86_RS12455	0.13	-0.1