Experiment: nitrate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07660 and ABZR86_RS07665 overlap by 4 nucleotides ABZR86_RS07665 and ABZR86_RS07670 overlap by 11 nucleotides
ABZR86_RS07660: ABZR86_RS07660 - exodeoxyribonuclease V subunit gamma, at 1,699,249 to 1,702,737
_RS07660
ABZR86_RS07665: ABZR86_RS07665 - exodeoxyribonuclease V subunit beta, at 1,702,734 to 1,706,405
_RS07665
ABZR86_RS07670: ABZR86_RS07670 - exodeoxyribonuclease V subunit alpha, at 1,706,395 to 1,708,341
_RS07670
Position (kb)
1702
1703
1704
1705
1706
1707 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1701.877 kb on + strand, within ABZR86_RS07660 at 1701.878 kb on - strand, within ABZR86_RS07660 at 1702.162 kb on + strand, within ABZR86_RS07660 at 1702.253 kb on - strand, within ABZR86_RS07660 at 1702.253 kb on - strand, within ABZR86_RS07660 at 1702.620 kb on + strand at 1702.624 kb on + strand at 1702.624 kb on + strand at 1702.625 kb on - strand at 1702.625 kb on - strand at 1702.625 kb on - strand at 1703.959 kb on - strand, within ABZR86_RS07665 at 1704.754 kb on + strand, within ABZR86_RS07665 at 1705.233 kb on + strand, within ABZR86_RS07665 at 1705.234 kb on - strand, within ABZR86_RS07665 at 1705.432 kb on + strand, within ABZR86_RS07665 at 1705.433 kb on - strand, within ABZR86_RS07665 at 1705.522 kb on - strand, within ABZR86_RS07665 at 1705.522 kb on - strand, within ABZR86_RS07665 at 1705.600 kb on + strand, within ABZR86_RS07665 at 1705.601 kb on - strand, within ABZR86_RS07665 at 1705.995 kb on - strand, within ABZR86_RS07665 at 1706.094 kb on + strand at 1706.095 kb on - strand at 1706.106 kb on + strand at 1706.142 kb on + strand at 1706.196 kb on + strand at 1706.205 kb on + strand at 1706.205 kb on + strand at 1706.251 kb on - strand at 1706.940 kb on + strand, within ABZR86_RS07670
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 150 mM remove 1,701,877 + ABZR86_RS07660 0.75 -1.0 1,701,878 - ABZR86_RS07660 0.75 -1.2 1,702,162 + ABZR86_RS07660 0.83 +0.3 1,702,253 - ABZR86_RS07660 0.86 -2.2 1,702,253 - ABZR86_RS07660 0.86 -0.1 1,702,620 + -0.6 1,702,624 + -2.1 1,702,624 + -1.5 1,702,625 - -0.6 1,702,625 - -2.6 1,702,625 - -2.4 1,703,959 - ABZR86_RS07665 0.33 -0.9 1,704,754 + ABZR86_RS07665 0.55 -2.1 1,705,233 + ABZR86_RS07665 0.68 -0.2 1,705,234 - ABZR86_RS07665 0.68 -1.4 1,705,432 + ABZR86_RS07665 0.73 -1.2 1,705,433 - ABZR86_RS07665 0.74 -0.9 1,705,522 - ABZR86_RS07665 0.76 -1.8 1,705,522 - ABZR86_RS07665 0.76 -0.6 1,705,600 + ABZR86_RS07665 0.78 -1.1 1,705,601 - ABZR86_RS07665 0.78 -3.7 1,705,995 - ABZR86_RS07665 0.89 -1.3 1,706,094 + -2.2 1,706,095 - +1.0 1,706,106 + -1.9 1,706,142 + -1.5 1,706,196 + -1.9 1,706,205 + -1.9 1,706,205 + -0.6 1,706,251 - -1.1 1,706,940 + ABZR86_RS07670 0.28 -0.9
Or see this region's nucleotide sequence