Experiment: nitrate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03425 and ABZR86_RS03430 are separated by 40 nucleotides ABZR86_RS03430 and ABZR86_RS03435 are separated by 151 nucleotides ABZR86_RS03435 and ABZR86_RS03440 are separated by 63 nucleotides ABZR86_RS03440 and ABZR86_RS03445 are separated by 160 nucleotides
ABZR86_RS03425: ABZR86_RS03425 - hypothetical protein, at 731,056 to 731,727
_RS03425
ABZR86_RS03430: ABZR86_RS03430 - putative quinol monooxygenase, at 731,768 to 732,073
_RS03430
ABZR86_RS03435: ABZR86_RS03435 - GTP cyclohydrolase II, at 732,225 to 732,881
_RS03435
ABZR86_RS03440: ABZR86_RS03440 - DoxX family protein, at 732,945 to 733,361
_RS03440
ABZR86_RS03445: ABZR86_RS03445 - TetR/AcrR family transcriptional regulator, at 733,522 to 734,160
_RS03445
Position (kb) 732
733 Strain fitness (log2 ratio) -2
-1
0
1 at 731.512 kb on + strand, within ABZR86_RS03425 at 731.977 kb on + strand, within ABZR86_RS03430 at 731.978 kb on - strand, within ABZR86_RS03430 at 732.145 kb on + strand at 732.145 kb on + strand at 732.145 kb on + strand at 732.146 kb on - strand at 732.302 kb on + strand, within ABZR86_RS03435 at 732.302 kb on + strand, within ABZR86_RS03435 at 732.303 kb on - strand, within ABZR86_RS03435 at 732.493 kb on + strand, within ABZR86_RS03435 at 732.493 kb on + strand, within ABZR86_RS03435 at 732.493 kb on + strand, within ABZR86_RS03435 at 732.493 kb on + strand, within ABZR86_RS03435 at 732.494 kb on - strand, within ABZR86_RS03435 at 732.542 kb on - strand, within ABZR86_RS03435 at 732.572 kb on + strand, within ABZR86_RS03435 at 732.572 kb on + strand, within ABZR86_RS03435 at 732.572 kb on + strand, within ABZR86_RS03435 at 732.573 kb on - strand, within ABZR86_RS03435 at 732.574 kb on + strand, within ABZR86_RS03435 at 732.574 kb on + strand, within ABZR86_RS03435 at 732.574 kb on + strand, within ABZR86_RS03435 at 732.574 kb on + strand, within ABZR86_RS03435 at 732.574 kb on + strand, within ABZR86_RS03435 at 732.575 kb on - strand, within ABZR86_RS03435 at 732.575 kb on - strand, within ABZR86_RS03435 at 732.583 kb on + strand, within ABZR86_RS03435 at 732.769 kb on + strand, within ABZR86_RS03435 at 732.769 kb on + strand, within ABZR86_RS03435 at 732.770 kb on - strand, within ABZR86_RS03435 at 732.770 kb on - strand, within ABZR86_RS03435 at 732.770 kb on - strand, within ABZR86_RS03435 at 732.770 kb on - strand, within ABZR86_RS03435 at 732.917 kb on + strand at 732.917 kb on + strand at 733.681 kb on + strand, within ABZR86_RS03445
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 150 mM remove 731,512 + ABZR86_RS03425 0.68 -0.5 731,977 + ABZR86_RS03430 0.68 +0.3 731,978 - ABZR86_RS03430 0.69 +0.6 732,145 + +0.7 732,145 + +1.0 732,145 + +0.7 732,146 - +0.1 732,302 + ABZR86_RS03435 0.12 -0.1 732,302 + ABZR86_RS03435 0.12 +0.6 732,303 - ABZR86_RS03435 0.12 -0.3 732,493 + ABZR86_RS03435 0.41 -1.8 732,493 + ABZR86_RS03435 0.41 -0.6 732,493 + ABZR86_RS03435 0.41 -1.3 732,493 + ABZR86_RS03435 0.41 -0.6 732,494 - ABZR86_RS03435 0.41 -0.7 732,542 - ABZR86_RS03435 0.48 -0.0 732,572 + ABZR86_RS03435 0.53 -1.3 732,572 + ABZR86_RS03435 0.53 -1.3 732,572 + ABZR86_RS03435 0.53 -0.6 732,573 - ABZR86_RS03435 0.53 -0.5 732,574 + ABZR86_RS03435 0.53 -0.0 732,574 + ABZR86_RS03435 0.53 -1.7 732,574 + ABZR86_RS03435 0.53 -2.4 732,574 + ABZR86_RS03435 0.53 -0.5 732,574 + ABZR86_RS03435 0.53 -0.7 732,575 - ABZR86_RS03435 0.53 +0.5 732,575 - ABZR86_RS03435 0.53 -0.2 732,583 + ABZR86_RS03435 0.54 -0.2 732,769 + ABZR86_RS03435 0.83 -0.1 732,769 + ABZR86_RS03435 0.83 -1.4 732,770 - ABZR86_RS03435 0.83 +0.1 732,770 - ABZR86_RS03435 0.83 -1.6 732,770 - ABZR86_RS03435 0.83 -1.0 732,770 - ABZR86_RS03435 0.83 +1.7 732,917 + -0.3 732,917 + -0.0 733,681 + ABZR86_RS03445 0.25 -0.3
Or see this region's nucleotide sequence