Experiment: MoYLS4 with benzoic 0.64 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3073 and DvMF_3074 are separated by 341 nucleotides DvMF_3074 and DvMF_3075 are separated by 300 nucleotides
DvMF_3073: DvMF_3073 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,879,808 to 3,881,841
_3073
DvMF_3074: DvMF_3074 - response regulator receiver modulated metal dependent phosphohydrolase (RefSeq), at 3,882,183 to 3,883,274
_3074
DvMF_3075: DvMF_3075 - signal transduction histidine kinase regulating citrate/malate metabolism (RefSeq), at 3,883,575 to 3,884,486
_3075
Position (kb)
3882
3883
3884 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3881.272 kb on + strand, within DvMF_3073 at 3881.280 kb on - strand, within DvMF_3073 at 3881.298 kb on + strand, within DvMF_3073 at 3881.393 kb on - strand, within DvMF_3073 at 3881.393 kb on - strand, within DvMF_3073 at 3881.477 kb on + strand, within DvMF_3073 at 3881.516 kb on + strand, within DvMF_3073 at 3881.987 kb on + strand at 3882.059 kb on + strand at 3882.061 kb on - strand at 3882.276 kb on + strand at 3882.346 kb on - strand, within DvMF_3074 at 3882.538 kb on + strand, within DvMF_3074 at 3882.606 kb on + strand, within DvMF_3074 at 3882.672 kb on - strand, within DvMF_3074 at 3882.711 kb on + strand, within DvMF_3074 at 3882.729 kb on + strand, within DvMF_3074 at 3882.778 kb on + strand, within DvMF_3074 at 3882.813 kb on - strand, within DvMF_3074 at 3882.860 kb on + strand, within DvMF_3074 at 3882.860 kb on + strand, within DvMF_3074 at 3882.908 kb on + strand, within DvMF_3074 at 3882.932 kb on + strand, within DvMF_3074 at 3882.966 kb on - strand, within DvMF_3074 at 3883.008 kb on + strand, within DvMF_3074 at 3883.369 kb on + strand at 3883.377 kb on - strand at 3883.647 kb on + strand at 3883.647 kb on + strand at 3883.680 kb on + strand, within DvMF_3075 at 3883.849 kb on - strand, within DvMF_3075 at 3883.862 kb on - strand, within DvMF_3075 at 3883.956 kb on + strand, within DvMF_3075 at 3883.987 kb on - strand, within DvMF_3075
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with benzoic 0.64 mg/ml remove 3,881,272 + DvMF_3073 0.72 -0.1 3,881,280 - DvMF_3073 0.72 +0.1 3,881,298 + DvMF_3073 0.73 +0.1 3,881,393 - DvMF_3073 0.78 -0.4 3,881,393 - DvMF_3073 0.78 -0.2 3,881,477 + DvMF_3073 0.82 -0.5 3,881,516 + DvMF_3073 0.84 -0.4 3,881,987 + -0.5 3,882,059 + -0.1 3,882,061 - -0.1 3,882,276 + -0.5 3,882,346 - DvMF_3074 0.15 -0.5 3,882,538 + DvMF_3074 0.33 -0.4 3,882,606 + DvMF_3074 0.39 +0.3 3,882,672 - DvMF_3074 0.45 -0.5 3,882,711 + DvMF_3074 0.48 -0.1 3,882,729 + DvMF_3074 0.50 -0.2 3,882,778 + DvMF_3074 0.54 -0.2 3,882,813 - DvMF_3074 0.58 -0.2 3,882,860 + DvMF_3074 0.62 -0.5 3,882,860 + DvMF_3074 0.62 -0.6 3,882,908 + DvMF_3074 0.66 +0.0 3,882,932 + DvMF_3074 0.69 -0.2 3,882,966 - DvMF_3074 0.72 -0.7 3,883,008 + DvMF_3074 0.76 -0.6 3,883,369 + -0.6 3,883,377 - -0.3 3,883,647 + -1.9 3,883,647 + -2.3 3,883,680 + DvMF_3075 0.12 -3.1 3,883,849 - DvMF_3075 0.30 -1.9 3,883,862 - DvMF_3075 0.31 -2.1 3,883,956 + DvMF_3075 0.42 -2.4 3,883,987 - DvMF_3075 0.45 -2.1
Or see this region's nucleotide sequence