Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2051
Experiment: MoYLS4 with benzoic 0.64 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with benzoic 0.64 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,544,459 | - | -0.6 | |||
| 2,544,490 | - | -0.1 | |||
| 2,544,492 | + | -0.2 | |||
| 2,544,500 | - | +0.0 | |||
| 2,544,519 | + | -0.6 | |||
| 2,544,572 | - | -0.3 | |||
| 2,544,683 | - | +0.2 | |||
| 2,544,771 | - | DvMF_2052 | 0.19 | +0.0 | |
| 2,544,798 | - | DvMF_2052 | 0.24 | -0.1 | |
| 2,544,826 | - | DvMF_2052 | 0.29 | -1.6 | |
| 2,544,829 | + | DvMF_2052 | 0.30 | -0.3 | |
| 2,544,837 | - | DvMF_2052 | 0.31 | +0.4 | |
| 2,544,837 | - | DvMF_2052 | 0.31 | -0.2 | |
| 2,544,931 | - | DvMF_2052 | 0.48 | -0.2 | |
| 2,544,933 | - | DvMF_2052 | 0.48 | -0.2 | |
| 2,544,966 | - | DvMF_2052 | 0.54 | -0.7 | |
| 2,545,039 | + | DvMF_2052 | 0.67 | -0.1 | |
| 2,545,047 | - | DvMF_2052 | 0.68 | -0.1 | |
| 2,545,058 | - | DvMF_2052 | 0.70 | -0.3 | |
| 2,545,233 | - | +0.0 | |||
| 2,545,233 | - | -0.5 | |||
| 2,545,233 | - | -0.1 | |||
| 2,545,419 | - | +0.6 | |||
| 2,545,427 | + | -0.1 | |||
| 2,545,427 | + | -0.2 |
Or see this region's nucleotide sequence