Experiment: MoYLS4 with benzoic 0.64 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1225 and DvMF_1226 are separated by 237 nucleotides DvMF_1226 and DvMF_1227 are separated by 582 nucleotides
DvMF_1225: DvMF_1225 - signal transduction histidine kinase, LytS (RefSeq), at 1,509,712 to 1,511,523
_1225
DvMF_1226: DvMF_1226 - carbon starvation protein CstA (RefSeq), at 1,511,761 to 1,513,164
_1226
DvMF_1227: DvMF_1227 - carbon starvation protein CstA (RefSeq), at 1,513,747 to 1,515,558
_1227
Position (kb)
1511
1512
1513
1514 Strain fitness (log2 ratio)
-1
0
1 at 1510.843 kb on + strand, within DvMF_1225 at 1511.085 kb on - strand, within DvMF_1225 at 1511.248 kb on + strand, within DvMF_1225 at 1511.574 kb on - strand at 1511.771 kb on + strand at 1511.873 kb on - strand at 1511.968 kb on + strand, within DvMF_1226 at 1511.983 kb on - strand, within DvMF_1226 at 1512.516 kb on - strand, within DvMF_1226 at 1512.594 kb on + strand, within DvMF_1226 at 1512.826 kb on + strand, within DvMF_1226 at 1512.861 kb on - strand, within DvMF_1226 at 1512.870 kb on + strand, within DvMF_1226 at 1513.166 kb on - strand at 1513.242 kb on - strand at 1513.252 kb on - strand at 1513.323 kb on - strand at 1513.449 kb on - strand at 1513.983 kb on + strand, within DvMF_1227 at 1514.032 kb on - strand, within DvMF_1227 at 1514.041 kb on + strand, within DvMF_1227 at 1514.041 kb on + strand, within DvMF_1227 at 1514.061 kb on - strand, within DvMF_1227 at 1514.091 kb on - strand, within DvMF_1227 at 1514.091 kb on - strand, within DvMF_1227 at 1514.091 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with benzoic 0.64 mg/ml remove 1,510,843 + DvMF_1225 0.62 -0.5 1,511,085 - DvMF_1225 0.76 -0.6 1,511,248 + DvMF_1225 0.85 -0.6 1,511,574 - -0.3 1,511,771 + -0.3 1,511,873 - -0.6 1,511,968 + DvMF_1226 0.15 -0.4 1,511,983 - DvMF_1226 0.16 -0.1 1,512,516 - DvMF_1226 0.54 -0.4 1,512,594 + DvMF_1226 0.59 -0.1 1,512,826 + DvMF_1226 0.76 -0.3 1,512,861 - DvMF_1226 0.78 -0.6 1,512,870 + DvMF_1226 0.79 -0.4 1,513,166 - -0.6 1,513,242 - -0.3 1,513,252 - -0.3 1,513,323 - -0.3 1,513,449 - -0.8 1,513,983 + DvMF_1227 0.13 -0.1 1,514,032 - DvMF_1227 0.16 -0.2 1,514,041 + DvMF_1227 0.16 -0.0 1,514,041 + DvMF_1227 0.16 -0.3 1,514,061 - DvMF_1227 0.17 -0.1 1,514,091 - DvMF_1227 0.19 -0.2 1,514,091 - DvMF_1227 0.19 +0.3 1,514,091 - +1.0
Or see this region's nucleotide sequence