Strain Fitness in Shewanella loihica PV-4 around Shew_3777

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
4,495,595	+		Shew_3776	0.52	-0.5
4,495,600	+		Shew_3776	0.52	-0.4
4,495,608	-		Shew_3776	0.53	-0.3
4,495,608	-		Shew_3776	0.53	-0.3
4,495,608	-		Shew_3776	0.53	-0.1
4,495,613	+		Shew_3776	0.53	+0.1
4,495,621	-		Shew_3776	0.53	-0.3
4,495,621	-		Shew_3776	0.53	-0.1
4,495,658	-		Shew_3776	0.55	-0.6
4,496,090	-		Shew_3776	0.80	-1.4
4,496,241	-		Shew_3776	0.88	-0.1
4,496,272	+		Shew_3776	0.90	-0.7
4,496,272	+		Shew_3776	0.90	-1.1
4,496,272	+		Shew_3776	0.90	-1.3
4,496,280	-				+0.1
4,496,371	+				-1.0
4,496,596	-				+0.2
4,496,789	+		Shew_3777	0.16	-0.9
4,496,789	+		Shew_3777	0.16	-0.6
4,496,925	+		Shew_3777	0.27	-0.3
4,496,995	-		Shew_3777	0.32	+0.1
4,496,996	+		Shew_3777	0.33	-0.1
4,497,041	+		Shew_3777	0.36	+0.1
4,497,054	+		Shew_3777	0.37	+0.5
4,497,054	+		Shew_3777	0.37	+0.7
4,497,054	+		Shew_3777	0.37	-0.1
4,497,067	-		Shew_3777	0.38	-1.3
4,497,072	-		Shew_3777	0.39	-0.1
4,497,163	+		Shew_3777	0.46	-0.2
4,497,319	-		Shew_3777	0.58	+1.0
4,497,455	-		Shew_3777	0.69	+0.7
4,497,509	+		Shew_3777	0.73	+0.0
4,497,530	+		Shew_3777	0.75	-0.1
4,497,588	-		Shew_3777	0.79	-0.5
4,497,614	+		Shew_3777	0.81	+0.2
4,497,614	+		Shew_3777	0.81	+0.6
4,497,617	-		Shew_3777	0.82	+0.2
4,497,769	+				-0.1
4,497,845	+				+1.1
4,498,001	-		Shew_3778	0.18	+1.1
4,498,001	-		Shew_3778	0.18	+0.6
4,498,026	-		Shew_3778	0.21	+0.1
4,498,066	+		Shew_3778	0.26	+0.6
4,498,190	+		Shew_3778	0.41	+0.1
4,498,247	+		Shew_3778	0.47	+0.6
4,498,270	+		Shew_3778	0.50	+0.5
4,498,281	-		Shew_3778	0.51	+1.2
4,498,296	-		Shew_3778	0.53	+0.1
4,498,388	-		Shew_3778	0.64	+0.1
4,498,397	+		Shew_3778	0.65	+0.6