Strain Fitness in Shewanella loihica PV-4 around Shew_3762

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
4,479,371	+				-0.4
4,479,387	+				+0.0
4,479,393	+				+0.4
4,479,398	+				+0.2
4,479,415	+				+0.7
4,479,415	+				+0.3
4,479,415	+				+0.8
4,479,419	+				+0.4
4,479,419	+				+0.7
4,479,419	+				-0.3
4,479,420	+				+1.0
4,479,420	+				-1.5
4,479,422	-				+0.1
4,479,427	-				-0.0
4,479,427	-				-0.2
4,479,427	-				+0.3
4,479,427	-				-0.2
4,479,427	-				-1.0
4,479,427	-				+0.0
4,479,448	+				+0.1
4,479,456	-				-2.0
4,479,472	-				+0.3
4,479,486	-				-0.2
4,479,493	+				+0.5
4,479,493	+				-1.1
4,479,493	+				-1.3
4,479,493	+				-0.2
4,479,493	+				+0.0
4,479,493	+				+0.2
4,479,493	+				+1.2
4,479,493	+				-0.3
4,479,493	+				-2.9
4,479,493	+				-0.0
4,479,493	+				-0.1
4,479,493	+				+0.1
4,479,494	-				+0.6
4,479,501	-				-0.2
4,479,501	-				-2.6
4,479,501	-				+0.0
4,479,501	-				+0.8
4,479,501	-				-0.5
4,479,514	+				+0.3
4,479,522	-				+1.2
4,479,524	+				-0.0
4,479,524	+				-0.1
4,479,524	+				-1.5
4,479,525	+				+0.0
4,479,525	+				+0.3
4,479,525	-				-0.2
4,479,525	+				+1.2
4,479,525	+				-0.1
4,479,527	+				+0.3
4,479,532	-				-0.1
4,479,533	-				+0.6
4,479,533	-				+0.1
4,479,535	-				+0.2
4,479,535	-				+0.4
4,479,545	-				-0.7
4,479,545	-				-0.6
4,479,627	+				+1.2
4,479,637	+				+1.4
4,479,637	+				-0.3
4,479,637	+				+0.5
4,479,637	+				-1.1
4,479,637	+				-2.5
4,479,637	+				+0.4
4,479,645	-				-0.0
4,479,645	-				+0.1
4,479,645	-				+0.2
4,479,645	-				+0.3
4,479,645	-				+0.1
4,479,645	-				-0.0
4,479,645	-				-0.0
4,479,645	-				+0.3
4,479,645	-				-0.1
4,479,726	+				+0.4
4,479,772	+				-0.0
4,479,772	-				-0.6
4,479,819	+				-0.2
4,479,844	-				-0.9
4,479,877	-		Shew_3761	0.21	-0.3
4,479,888	+		Shew_3761	0.26	+0.2
4,480,076	-				+0.4
4,480,248	-				+0.0
4,480,262	-				+0.4
4,480,289	+				+1.0
4,480,310	-				+0.4
4,480,329	+				-0.5
4,480,372	-				+0.4
4,480,372	-				+0.6
4,480,407	+				+0.2
4,480,491	-		Shew_3762	0.12	-0.0
4,480,528	+		Shew_3762	0.15	-1.3
4,480,546	-		Shew_3762	0.17	-0.9
4,480,568	-		Shew_3762	0.19	-0.9
4,480,832	-		Shew_3762	0.43	-0.3
4,480,855	+		Shew_3762	0.45	+0.2
4,480,928	-		Shew_3762	0.52	+0.8
4,481,148	-		Shew_3762	0.73	+0.3
4,481,250	-		Shew_3762	0.82	+0.0
4,481,264	+		Shew_3762	0.83	-0.6
4,481,354	+				+0.1
4,481,362	-				+0.3
4,481,375	-				+0.2
4,481,392	-				-1.0
4,481,639	+		Shew_3763	0.31	+0.4
4,481,639	+		Shew_3763	0.31	+0.2
4,481,647	-		Shew_3763	0.32	+0.1
4,481,647	-		Shew_3763	0.32	+0.4
4,481,647	-		Shew_3763	0.32	-1.2
4,481,647	-		Shew_3763	0.32	+0.1
4,481,647	-		Shew_3763	0.32	-0.1
4,481,762	-		Shew_3763	0.54	-2.5
4,481,812	+		Shew_3763	0.63	+0.4
4,481,852	+		Shew_3763	0.71	-0.0
4,482,263	+				+1.1