Strain Fitness in Shewanella loihica PV-4 around Shew_2564

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
3,021,347	+		Shew_2563	0.20	+0.5
3,021,441	+		Shew_2563	0.30	+0.6
3,021,449	-		Shew_2563	0.30	+0.4
3,021,933	-		Shew_2563	0.79	+0.4
3,021,961	-		Shew_2563	0.82	+0.1
3,022,036	+		Shew_2563	0.89	+0.8
3,022,036	+		Shew_2563	0.89	-0.0
3,022,044	-				-0.3
3,022,179	+				+1.0
3,022,303	+				-1.3
3,022,427	-		Shew_2564	0.11	-1.9
3,022,429	+		Shew_2564	0.11	-1.9
3,022,477	-		Shew_2564	0.17	-0.3
3,022,696	-		Shew_2564	0.44	-1.7
3,022,962	-		Shew_2564	0.77	-1.0
3,023,429	+		Shew_2565	0.22	+1.4
3,023,439	+		Shew_2565	0.25	-0.4
3,023,447	-		Shew_2565	0.29	+0.9
3,023,608	-				+0.6
3,023,608	-				+0.2
3,023,610	+				-1.7
3,023,618	-				+0.8
3,023,688	+				+0.0
3,023,803	-				+0.3
3,023,803	-				+0.3
3,023,898	+		Shew_2566	0.28	-1.9
3,023,906	-		Shew_2566	0.30	+0.5
3,024,038	+		Shew_2566	0.57	-0.4