Strain Fitness in Shewanella loihica PV-4 around Shew_2135

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
2,480,523	+		Shew_2134	0.72	-2.3
2,480,531	-		Shew_2134	0.74	+0.0
2,480,594	-		Shew_2134	0.88	+0.2
2,480,655	-				-0.2
2,480,760	-				+0.7
2,480,809	-				+0.0
2,480,907	-				-0.5
2,480,951	-				+1.3
2,480,974	+				+0.8
2,480,974	+				-0.3
2,481,076	-				+0.5
2,481,347	-	ushA	Shew_2135	0.18	+1.7
2,481,537	+	ushA	Shew_2135	0.29	+0.0
2,481,911	-	ushA	Shew_2135	0.51	-0.9
2,482,444	+	ushA	Shew_2135	0.82	+0.9
2,482,452	-	ushA	Shew_2135	0.82	+1.9
2,483,225	-				+0.8
2,483,506	+		Shew_2136	0.22	-0.0
2,483,514	-		Shew_2136	0.24	+0.0
2,483,514	-		Shew_2136	0.24	+0.0
2,483,708	+		Shew_2136	0.52	+0.4
2,483,716	-		Shew_2136	0.53	+0.8