Strain Fitness in Shewanella loihica PV-4 around Shew_1402

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
1,614,020	+		Shew_1401	0.21	-4.0
1,614,020	+		Shew_1401	0.21	-3.2
1,614,040	+		Shew_1401	0.23	-3.8
1,614,040	+		Shew_1401	0.23	-2.9
1,614,102	-		Shew_1401	0.28	-3.5
1,614,110	-		Shew_1401	0.29	-0.5
1,614,196	+		Shew_1401	0.37	-3.1
1,614,340	+		Shew_1401	0.50	-2.8
1,614,342	+		Shew_1401	0.50	-3.5
1,614,342	+		Shew_1401	0.50	-2.9
1,614,342	+		Shew_1401	0.50	-2.9
1,614,342	+		Shew_1401	0.50	-3.7
1,614,448	+		Shew_1401	0.60	-2.4
1,614,448	+		Shew_1401	0.60	-3.0
1,614,456	-		Shew_1401	0.60	-2.1
1,614,466	-		Shew_1401	0.61	-1.1
1,614,466	-		Shew_1401	0.61	+0.5
1,614,520	+		Shew_1401	0.66	-3.0
1,614,520	+		Shew_1401	0.66	-1.9
1,614,520	+		Shew_1401	0.66	-4.1
1,614,612	+		Shew_1401	0.75	-3.2
1,614,686	+		Shew_1401	0.81	-3.2
1,614,731	+		Shew_1401	0.86	-4.4
1,614,787	-				-0.5
1,614,787	+				-1.1
1,614,787	+				+0.7
1,614,795	-				-0.1
1,614,811	+				+0.6
1,614,848	+				-1.8
1,614,933	-				-1.1
1,615,134	+		Shew_1402	0.28	-3.9
1,615,142	+		Shew_1402	0.29	+0.9
1,615,147	+		Shew_1402	0.29	-2.7
1,615,147	+		Shew_1402	0.29	-2.1
1,615,153	+		Shew_1402	0.30	-4.1
1,615,296	+		Shew_1402	0.46	-3.5
1,615,327	-		Shew_1402	0.50	-0.5
1,615,500	+		Shew_1402	0.70	-5.1
1,615,557	+		Shew_1402	0.76	-4.2
1,615,559	+		Shew_1402	0.76	-3.3
1,615,604	+		Shew_1402	0.82	-2.0
1,615,604	+		Shew_1402	0.82	-2.2
1,615,622	+		Shew_1402	0.84	-2.6
1,615,723	+				-4.2
1,615,780	+				-3.0
1,615,800	-				-1.5
1,615,853	+				-3.0
1,615,862	+		Shew_1403	0.10	-2.3
1,616,035	+		Shew_1403	0.30	-3.6
1,616,130	+		Shew_1403	0.41	-2.4
1,616,137	+		Shew_1403	0.42	-3.0
1,616,137	+		Shew_1403	0.42	-4.3
1,616,137	+		Shew_1403	0.42	-3.5
1,616,167	+		Shew_1403	0.45	-2.0
1,616,314	+		Shew_1403	0.62	-3.0
1,616,344	+		Shew_1403	0.66	-2.3
1,616,410	+		Shew_1403	0.73	-3.9
1,616,410	+		Shew_1403	0.73	-2.5
1,616,410	+		Shew_1403	0.73	-2.3
1,616,410	+		Shew_1403	0.73	-4.0
1,616,418	-		Shew_1403	0.74	+0.5
1,616,488	+		Shew_1403	0.82	-2.7
1,616,606	+				-3.5
1,616,614	-				+0.5
1,616,753	+		Shew_1404	0.20	-3.1
1,616,753	+		Shew_1404	0.20	-2.5
1,616,753	+		Shew_1404	0.20	-4.2
1,616,753	+		Shew_1404	0.20	-3.2
1,616,753	+		Shew_1404	0.20	-3.0