Strain Fitness in Shewanella loihica PV-4 around Shew_1353

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
1,560,534	-	flgI	Shew_1352	0.31	-1.1
1,560,599	+	flgI	Shew_1352	0.37	-1.0
1,560,656	-	flgI	Shew_1352	0.42	-1.3
1,560,656	-	flgI	Shew_1352	0.42	-1.4
1,561,077	-	flgI	Shew_1352	0.81	-0.3
1,561,077	-	flgI	Shew_1352	0.81	-1.5
1,561,446	+	flgJ	Shew_1353	0.11	-1.3
1,561,928	+	flgJ	Shew_1353	0.58	-0.9
1,562,229	-	flgJ	Shew_1353	0.87	-1.5
1,562,337	+				+0.5
1,563,151	+		Shew_1354	0.38	-0.8