Strain Fitness in Shewanella loihica PV-4 around Shew_1226

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
1,422,720	+				+3.2
1,423,070	+		Shew_1225	0.34	-0.8
1,423,089	+		Shew_1225	0.39	-2.2
1,423,251	+		Shew_1225	0.77	-0.7
1,423,400	+				+0.9
1,423,400	+				+0.8
1,423,408	-				-1.6
1,423,732	+		Shew_1226	0.11	-0.5
1,423,740	-		Shew_1226	0.11	-1.3
1,424,128	+		Shew_1226	0.24	-0.5
1,424,201	+		Shew_1226	0.27	-0.9
1,424,251	-		Shew_1226	0.29	-1.3
1,424,474	+		Shew_1226	0.37	-1.6
1,424,596	+		Shew_1226	0.41	-0.4
1,424,903	+		Shew_1226	0.52	-0.7
1,424,986	-		Shew_1226	0.55	-0.1
1,425,360	-		Shew_1226	0.68	-0.9
1,425,438	-		Shew_1226	0.71	-1.2
1,425,438	-		Shew_1226	0.71	-0.1
1,425,438	-		Shew_1226	0.71	-3.0
1,425,544	+		Shew_1226	0.74	-0.7
1,425,562	-		Shew_1226	0.75	-2.5
1,425,677	+		Shew_1226	0.79	-1.7
1,425,766	+		Shew_1226	0.82	-1.7
1,425,824	+		Shew_1226	0.84	-0.2
1,425,886	-		Shew_1226	0.86	-0.6
1,425,944	+		Shew_1226	0.89	-1.8
1,426,008	-				-1.0
1,426,153	-				-0.9
1,426,241	-				-0.8
1,426,602	+				+2.1
1,426,706	+		Shew_1227	0.15	+1.6