Strain Fitness in Shewanella loihica PV-4 around Shew_1009

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
1,166,461	-		Shew_1009	0.18	-2.7
1,166,524	-		Shew_1009	0.21	-0.6
1,166,578	-		Shew_1009	0.24	-3.4
1,166,597	-		Shew_1009	0.26	-2.7
1,166,715	+		Shew_1009	0.32	-1.8
1,166,733	-		Shew_1009	0.33	-3.4
1,166,766	-		Shew_1009	0.35	-2.8
1,167,007	+		Shew_1009	0.49	-2.8
1,167,063	+		Shew_1009	0.52	-0.9
1,167,071	-		Shew_1009	0.52	-2.3
1,167,071	-		Shew_1009	0.52	-2.3
1,167,086	-		Shew_1009	0.53	-2.7
1,167,106	-		Shew_1009	0.54	-2.3
1,167,400	-		Shew_1009	0.71	-3.1
1,167,642	-		Shew_1009	0.85	-2.2
1,167,989	+				-2.4
1,167,997	-				-1.9
1,168,243	-		Shew_1010	0.30	-1.8
1,168,513	+		Shew_1010	0.54	-3.1
1,168,521	-		Shew_1010	0.54	-2.5
1,168,769	+		Shew_1010	0.76	-2.6
1,168,811	+		Shew_1010	0.80	+1.2