Strain Fitness in Shewanella loihica PV-4 around Shew_0824
Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 20 mg/ml |
---|---|---|---|---|---|
remove | |||||
946,430 | + | Shew_0823 | 0.25 | +0.3 | |
946,678 | - | Shew_0823 | 0.53 | -0.4 | |
946,792 | + | Shew_0823 | 0.65 | +0.3 | |
946,935 | + | Shew_0823 | 0.81 | +0.6 | |
947,461 | + | Shew_0824 | 0.35 | +2.4 | |
947,588 | - | Shew_0824 | 0.55 | -0.0 | |
947,618 | + | Shew_0824 | 0.59 | +0.2 | |
947,788 | + | Shew_0824 | 0.86 | +1.1 | |
947,958 | + | -0.0 | |||
947,966 | - | -0.0 | |||
947,966 | - | +0.3 | |||
948,015 | + | +2.5 | |||
948,699 | - | +1.4 | |||
948,752 | + | +0.6 |
Or see this region's nucleotide sequence