Strain Fitness in Shewanella loihica PV-4 around Shew_0116

Experiment: Polymyxin B sulfate 20 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 20 mg/ml
126,842	+				-0.2
126,921	+				+0.3
126,921	+				-1.2
126,974	-		Shew_0114	0.15	-1.0
127,124	+		Shew_0114	0.57	+0.7
127,207	-		Shew_0114	0.80	+0.3
127,228	-		Shew_0114	0.85	-0.2
127,350	-		Shew_0115	0.24	-0.6
127,817	+		Shew_0116	0.12	-0.5
127,874	-		Shew_0116	0.21	+0.6
127,933	+		Shew_0116	0.30	+0.1
128,238	+		Shew_0116	0.78	-0.6
128,260	-		Shew_0116	0.82	-2.3
128,324	+				+0.2
128,349	+				+0.1
128,526	-		Shew_0117	0.16	-0.4
128,534	-		Shew_0117	0.17	-1.8
128,568	+		Shew_0117	0.21	+0.4
128,568	+		Shew_0117	0.21	+1.8
128,571	-		Shew_0117	0.21	-0.2
128,573	+		Shew_0117	0.21	-0.1
128,573	+		Shew_0117	0.21	+0.0
128,573	+		Shew_0117	0.21	-0.1
128,576	-		Shew_0117	0.22	+1.7
128,576	-		Shew_0117	0.22	+0.1
128,576	-		Shew_0117	0.22	-0.4
128,581	-		Shew_0117	0.22	+1.3
128,581	-		Shew_0117	0.22	-0.4
128,581	-		Shew_0117	0.22	-0.7
128,581	-		Shew_0117	0.22	+0.1
128,603	+		Shew_0117	0.25	+0.4
128,904	-		Shew_0117	0.58	-1.1
128,930	+		Shew_0117	0.61	+1.3
128,943	+		Shew_0117	0.62	+0.5
129,133	+		Shew_0117	0.83	-0.2
129,209	-				+0.1
129,254	+				+0.1
129,312	+				-1.8
129,335	-				+0.4