Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_622
Experiment: D-Cycloserine 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.12 mg/ml |
---|---|---|---|---|---|
remove | |||||
707,996 | - | Pf6N2E2_621 | 0.42 | -0.9 | |
708,275 | + | Pf6N2E2_621 | 0.58 | -0.5 | |
708,567 | + | Pf6N2E2_621 | 0.75 | +0.0 | |
708,634 | + | Pf6N2E2_621 | 0.79 | -1.1 | |
708,634 | + | Pf6N2E2_621 | 0.79 | -0.8 | |
708,635 | - | Pf6N2E2_621 | 0.79 | +0.0 | |
708,861 | + | -2.6 | |||
708,862 | - | -0.5 | |||
708,862 | - | -1.9 | |||
708,950 | - | -1.1 | |||
708,950 | - | -1.3 | |||
708,958 | + | -1.7 | |||
708,959 | - | -1.1 | |||
709,165 | + | Pf6N2E2_622 | 0.16 | -2.2 | |
709,166 | - | Pf6N2E2_622 | 0.16 | -1.2 | |
709,245 | + | Pf6N2E2_622 | 0.23 | -1.9 | |
709,639 | + | Pf6N2E2_622 | 0.60 | -0.5 | |
709,639 | + | Pf6N2E2_622 | 0.60 | +0.5 | |
709,640 | - | Pf6N2E2_622 | 0.60 | -0.3 | |
710,168 | - | Pf6N2E2_623 | 0.20 | +0.2 | |
710,628 | - | -0.8 | |||
711,067 | + | Pf6N2E2_624 | 0.54 | -1.5 |
Or see this region's nucleotide sequence