Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5965

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
6,782,922	-		Pf6N2E2_5963	0.78	+0.3
6,782,922	-		Pf6N2E2_5963	0.78	-1.7
6,782,922	-		Pf6N2E2_5963	0.78	+0.7
6,782,932	+		Pf6N2E2_5963	0.80	+0.1
6,782,932	+		Pf6N2E2_5963	0.80	-0.7
6,782,932	+		Pf6N2E2_5963	0.80	-0.3
6,782,933	-		Pf6N2E2_5963	0.80	+0.3
6,782,933	-		Pf6N2E2_5963	0.80	+0.5
6,782,961	+		Pf6N2E2_5963	0.85	+1.7
6,783,017	+				+0.3
6,783,018	-				+1.3
6,783,018	-				-0.9
6,783,018	-				+0.0
6,783,018	-				-1.5
6,783,018	-				+0.1
6,783,050	+				+0.1
6,783,050	+				+2.4
6,783,054	+				+0.1
6,783,054	+				+0.4
6,783,201	+		Pf6N2E2_5964	0.24	+2.1
6,783,204	+		Pf6N2E2_5964	0.24	-1.1
6,783,205	-		Pf6N2E2_5964	0.24	-1.5
6,783,205	-		Pf6N2E2_5964	0.24	-1.7
6,783,213	-		Pf6N2E2_5964	0.26	+0.5
6,783,213	-		Pf6N2E2_5964	0.26	-0.6
6,783,279	+		Pf6N2E2_5964	0.37	+1.2
6,783,279	+		Pf6N2E2_5964	0.37	+0.2
6,783,280	-		Pf6N2E2_5964	0.38	+0.7
6,783,280	-		Pf6N2E2_5964	0.38	-1.6
6,783,280	-		Pf6N2E2_5964	0.38	+0.5
6,783,280	-		Pf6N2E2_5964	0.38	+1.2
6,783,477	+		Pf6N2E2_5964	0.73	+0.4
6,783,477	+		Pf6N2E2_5964	0.73	+0.6
6,783,528	+		Pf6N2E2_5964	0.82	-0.7
6,783,528	+		Pf6N2E2_5964	0.82	+0.1
6,783,613	+				-1.3
6,783,767	+				-0.7
6,783,767	+				+0.7
6,783,768	-				-0.5
6,783,769	+				+0.4
6,783,769	+				-1.1
6,783,770	-				-0.0
6,783,770	-				+1.5
6,783,770	-				+1.0
6,784,177	-		Pf6N2E2_5965	0.52	-0.6
6,784,216	-		Pf6N2E2_5965	0.57	-1.7
6,784,266	-		Pf6N2E2_5965	0.63	-0.3
6,784,266	-		Pf6N2E2_5965	0.63	-0.9
6,784,473	+				+0.1
6,784,473	+				-0.8
6,784,474	-				-1.9
6,784,478	+				-0.3
6,784,479	-				-0.4
6,784,517	-				+1.4
6,784,613	+				+0.5
6,784,614	-				+0.1
6,784,703	-		Pf6N2E2_5966	0.19	+0.6
6,784,751	+		Pf6N2E2_5966	0.25	+1.1
6,784,914	+		Pf6N2E2_5966	0.43	-0.4
6,784,914	+		Pf6N2E2_5966	0.43	+0.4
6,784,914	+		Pf6N2E2_5966	0.43	-0.8
6,784,915	-		Pf6N2E2_5966	0.43	-0.6
6,785,037	-		Pf6N2E2_5966	0.57	-0.1
6,785,037	-		Pf6N2E2_5966	0.57	+0.9
6,785,066	+		Pf6N2E2_5966	0.61	+0.2
6,785,077	+		Pf6N2E2_5966	0.62	+0.3
6,785,171	+		Pf6N2E2_5966	0.73	-0.3
6,785,171	+		Pf6N2E2_5966	0.73	+0.3
6,785,171	+		Pf6N2E2_5966	0.73	-0.1
6,785,172	-		Pf6N2E2_5966	0.73	+1.8
6,785,173	+		Pf6N2E2_5966	0.73	-0.0
6,785,173	+		Pf6N2E2_5966	0.73	+1.8
6,785,174	-		Pf6N2E2_5966	0.73	+0.4
6,785,174	-		Pf6N2E2_5966	0.73	+0.7
6,785,174	-		Pf6N2E2_5966	0.73	+0.1
6,785,306	+		Pf6N2E2_5966	0.88	+1.6
6,785,306	+		Pf6N2E2_5966	0.88	-0.9
6,785,307	-		Pf6N2E2_5966	0.88	+0.2
6,785,307	-		Pf6N2E2_5966	0.88	+1.1
6,785,307	-		Pf6N2E2_5966	0.88	+2.5
6,785,374	+				-0.4
6,785,376	+				+0.7
6,785,376	+				+0.5
6,785,376	+				-1.0
6,785,376	+				-0.8
6,785,376	+				+0.6
6,785,377	-				-0.5
6,785,377	-				+0.9
6,785,393	-				-1.0
6,785,429	+				-0.6
6,785,429	+				+1.5
6,785,429	+				+1.4
6,785,430	-				+0.6
6,785,430	-				+0.2
6,785,437	+				-1.1
6,785,437	+				-0.3
6,785,437	+				-0.2
6,785,437	+				+1.1
6,785,437	+				+1.6
6,785,438	-				-1.2
6,785,438	-				+0.7
6,785,438	-				+0.2
6,785,439	+				+2.8
6,785,439	+				+0.5
6,785,467	+				+0.1
6,785,467	+				+1.1
6,785,468	-				-0.1
6,785,486	+				+1.6
6,785,487	-				-1.0