Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5861

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
6,680,693	+		Pf6N2E2_5860	0.41	+2.7
6,680,693	+		Pf6N2E2_5860	0.41	-0.3
6,680,693	+		Pf6N2E2_5860	0.41	-0.2
6,680,694	-		Pf6N2E2_5860	0.41	+0.5
6,680,694	-		Pf6N2E2_5860	0.41	+1.1
6,680,694	-		Pf6N2E2_5860	0.41	+0.9
6,680,694	-		Pf6N2E2_5860	0.41	-0.9
6,680,694	-		Pf6N2E2_5860	0.41	+1.3
6,680,694	-		Pf6N2E2_5860	0.41	-0.7
6,680,698	-		Pf6N2E2_5860	0.41	-0.8
6,680,698	-		Pf6N2E2_5860	0.41	-0.7
6,680,879	+		Pf6N2E2_5860	0.55	+0.6
6,680,879	+		Pf6N2E2_5860	0.55	+2.7
6,680,879	+		Pf6N2E2_5860	0.55	-0.2
6,680,880	-		Pf6N2E2_5860	0.55	-0.3
6,680,960	+		Pf6N2E2_5860	0.61	+0.6
6,680,960	+		Pf6N2E2_5860	0.61	-0.3
6,680,960	+		Pf6N2E2_5860	0.61	+1.1
6,681,092	+				+0.9
6,681,093	-		Pf6N2E2_5860	0.71	+1.0
6,681,093	-		Pf6N2E2_5860	0.71	+1.4
6,681,194	+		Pf6N2E2_5860	0.79	+0.6
6,681,194	+		Pf6N2E2_5860	0.79	+0.3
6,681,195	-		Pf6N2E2_5860	0.79	+0.9
6,681,653	-				-1.5
6,681,673	+				-1.1
6,681,673	+				-0.2
6,681,673	+				+1.2
6,681,674	-				-0.7
6,681,674	-				-0.8
6,681,674	-				-1.1
6,681,674	-				-1.1
6,681,674	-				-0.5
6,681,674	-				-1.3
6,681,674	-				-0.4
6,681,955	-		Pf6N2E2_5861	0.36	-2.7
6,681,996	+		Pf6N2E2_5861	0.42	-1.9
6,681,996	+		Pf6N2E2_5861	0.42	-0.9
6,681,996	+		Pf6N2E2_5861	0.42	-3.8
6,681,996	+		Pf6N2E2_5861	0.42	-0.4
6,681,996	+		Pf6N2E2_5861	0.42	-1.7
6,681,996	+		Pf6N2E2_5861	0.42	-1.0
6,681,996	+		Pf6N2E2_5861	0.42	-2.4
6,681,997	-		Pf6N2E2_5861	0.42	-0.7
6,681,997	-		Pf6N2E2_5861	0.42	-2.4
6,681,997	-		Pf6N2E2_5861	0.42	-0.4
6,681,997	-		Pf6N2E2_5861	0.42	-0.1
6,681,997	-		Pf6N2E2_5861	0.42	-0.7
6,681,997	-		Pf6N2E2_5861	0.42	-1.4
6,682,067	+		Pf6N2E2_5861	0.52	+0.5
6,682,104	-		Pf6N2E2_5861	0.57	-1.1
6,682,104	-		Pf6N2E2_5861	0.57	-1.1
6,682,104	-		Pf6N2E2_5861	0.57	-1.2
6,682,104	-		Pf6N2E2_5861	0.57	-1.0
6,682,247	+		Pf6N2E2_5861	0.76	-0.4
6,682,251	-		Pf6N2E2_5861	0.77	-1.1
6,682,294	-		Pf6N2E2_5861	0.82	+0.1
6,682,294	-		Pf6N2E2_5861	0.82	-0.7
6,682,332	-		Pf6N2E2_5861	0.88	-1.4
6,682,332	-		Pf6N2E2_5861	0.88	-0.9
6,682,332	-		Pf6N2E2_5861	0.88	-0.8
6,682,373	+				+0.9
6,682,373	+				-2.0
6,682,373	+				-0.5
6,682,373	+				-1.7
6,682,373	+				-0.8
6,682,373	+				+0.5
6,682,373	+				+0.0
6,682,373	+				-0.1
6,682,374	-				+0.3
6,682,374	-				-0.8
6,682,374	-				-0.1
6,682,374	-				+0.3
6,682,374	-				+1.2
6,682,374	-				-2.7
6,682,375	+				+0.2
6,682,376	-				-0.1
6,682,487	-				+0.2
6,682,494	+				-0.2
6,682,495	-				+0.9
6,682,603	+		Pf6N2E2_5862	0.43	-0.1
6,682,604	-		Pf6N2E2_5862	0.43	+0.3
6,682,738	+				-1.2
6,682,771	+				-0.9
6,682,772	-				+0.1
6,682,772	-				+0.5
6,682,802	-				-0.3
6,682,823	+				+0.8
6,682,823	+				+0.1
6,682,823	+				+0.4
6,682,823	+				+0.9
6,682,824	-				-0.9
6,682,824	-				+0.9
6,682,824	-				+0.7
6,682,824	-				+1.3
6,682,825	+				+0.1
6,682,826	-				+0.5
6,682,826	-				-0.1
6,682,826	-				-0.9
6,682,826	-				-0.3
6,682,826	-				+0.4
6,682,827	+				-1.2
6,682,827	+				+0.8
6,682,827	+				+0.1
6,682,827	+				-0.3
6,682,827	+				+0.8
6,682,828	-				+0.1
6,682,828	-				-0.3
6,682,828	-				-0.1
6,682,828	-				-1.5
6,682,828	-				+0.2
6,682,828	-				+0.6
6,683,105	+		Pf6N2E2_5863	0.43	+1.9
6,683,105	+		Pf6N2E2_5863	0.43	+0.6
6,683,105	+		Pf6N2E2_5863	0.43	-0.4
6,683,106	-		Pf6N2E2_5863	0.43	+0.1
6,683,106	-		Pf6N2E2_5863	0.43	+0.3
6,683,169	+		Pf6N2E2_5863	0.56	-0.4
6,683,169	+		Pf6N2E2_5863	0.56	-0.5
6,683,169	+		Pf6N2E2_5863	0.56	-1.1
6,683,169	+		Pf6N2E2_5863	0.56	+0.8
6,683,170	-		Pf6N2E2_5863	0.56	+0.6
6,683,170	-		Pf6N2E2_5863	0.56	+0.2
6,683,203	-		Pf6N2E2_5863	0.63	-0.1