Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5712

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
6,527,765	-				-0.0
6,527,816	+				-0.5
6,527,817	-				+0.9
6,527,817	-				+0.1
6,527,940	+		Pf6N2E2_5711	0.16	-0.6
6,527,940	+		Pf6N2E2_5711	0.16	-0.2
6,527,941	-		Pf6N2E2_5711	0.16	-0.2
6,527,941	-		Pf6N2E2_5711	0.16	-0.5
6,527,941	-		Pf6N2E2_5711	0.16	-0.3
6,527,941	-		Pf6N2E2_5711	0.16	-0.5
6,528,057	+		Pf6N2E2_5711	0.31	-1.4
6,528,106	-		Pf6N2E2_5711	0.36	-0.0
6,528,106	-		Pf6N2E2_5711	0.36	+0.5
6,528,183	+		Pf6N2E2_5711	0.46	-0.8
6,528,184	-		Pf6N2E2_5711	0.46	+0.2
6,528,184	-		Pf6N2E2_5711	0.46	-0.9
6,528,184	-		Pf6N2E2_5711	0.46	+0.7
6,528,184	-		Pf6N2E2_5711	0.46	+0.2
6,528,273	+		Pf6N2E2_5711	0.57	-0.0
6,528,274	-		Pf6N2E2_5711	0.57	+0.1
6,528,351	+		Pf6N2E2_5711	0.66	+0.2
6,528,352	-		Pf6N2E2_5711	0.66	-0.3
6,528,352	-		Pf6N2E2_5711	0.66	-0.7
6,528,379	-		Pf6N2E2_5711	0.70	-1.2
6,528,379	-		Pf6N2E2_5711	0.70	-0.7
6,528,646	-				-0.5
6,528,664	+				+0.1
6,528,664	+				+0.3
6,528,664	+				+1.1
6,528,664	+				+0.4
6,528,665	-				+0.5
6,528,665	-				+0.4
6,528,667	-				+0.4
6,528,667	-				+0.2
6,528,720	+				-0.2
6,528,720	+				-1.2
6,528,738	+				-0.0
6,528,738	+				-1.0
6,528,738	+				+0.3
6,528,739	-				-0.0
6,528,739	-				-0.6
6,528,739	-				+0.5
6,529,131	+		Pf6N2E2_5712	0.62	+0.2
6,529,131	+		Pf6N2E2_5712	0.62	+1.4
6,529,218	+		Pf6N2E2_5712	0.75	+0.9
6,529,219	-		Pf6N2E2_5712	0.75	-0.7
6,529,219	-		Pf6N2E2_5712	0.75	-0.1
6,529,219	-		Pf6N2E2_5712	0.75	+0.5
6,529,351	+				+0.4
6,529,368	+				+0.8
6,529,369	-				-0.7
6,529,369	-				-0.2
6,529,369	-				-1.1
6,529,369	-				-2.3
6,529,370	+				+1.0
6,529,371	-				-1.0
6,529,371	-				-0.2
6,529,463	+				-0.5
6,529,469	+				-0.3
6,529,469	+				+0.1
6,529,470	-				+0.0
6,529,470	-				-0.9
6,529,470	-				+0.3
6,529,470	-				-1.5
6,529,470	-				+0.8
6,529,470	-				+0.1
6,529,470	-				-1.0
6,529,470	-				-0.8
6,529,470	-				+0.2
6,529,470	-				-0.9
6,529,470	-				+0.1
6,529,472	-				+0.5
6,529,472	-				+1.1
6,529,472	-				-0.6
6,529,537	+		Pf6N2E2_5713	0.15	-0.0
6,529,537	+		Pf6N2E2_5713	0.15	-0.0
6,529,538	-		Pf6N2E2_5713	0.15	+0.5
6,529,538	-		Pf6N2E2_5713	0.15	-0.6
6,529,538	-		Pf6N2E2_5713	0.15	-0.4
6,529,538	-		Pf6N2E2_5713	0.15	+0.4
6,529,538	-		Pf6N2E2_5713	0.15	-0.8
6,529,538	-		Pf6N2E2_5713	0.15	-0.5
6,529,538	-		Pf6N2E2_5713	0.15	-0.8
6,529,538	-		Pf6N2E2_5713	0.15	-1.2
6,529,538	-		Pf6N2E2_5713	0.15	-1.4
6,529,612	+		Pf6N2E2_5713	0.33	-0.4
6,529,613	-		Pf6N2E2_5713	0.33	-0.2
6,529,639	+		Pf6N2E2_5713	0.39	-0.1
6,529,639	+		Pf6N2E2_5713	0.39	-0.7
6,529,639	+		Pf6N2E2_5713	0.39	-0.3
6,529,640	-		Pf6N2E2_5713	0.39	-0.8
6,529,640	-		Pf6N2E2_5713	0.39	-1.8
6,529,707	+		Pf6N2E2_5713	0.55	-0.8
6,529,780	+		Pf6N2E2_5713	0.72	+1.8
6,529,780	+		Pf6N2E2_5713	0.72	-0.9
6,529,780	+		Pf6N2E2_5713	0.72	-0.6
6,529,781	-		Pf6N2E2_5713	0.72	-0.3
6,529,783	+		Pf6N2E2_5713	0.73	-0.3
6,529,783	+		Pf6N2E2_5713	0.73	+1.0
6,529,784	-		Pf6N2E2_5713	0.73	-0.7
6,529,845	+		Pf6N2E2_5713	0.87	+0.1
6,529,893	-				-0.7
6,530,228	+		Pf6N2E2_5714	0.56	-1.0
6,530,229	-		Pf6N2E2_5714	0.56	+1.2
6,530,229	-		Pf6N2E2_5714	0.56	+1.6
6,530,229	-		Pf6N2E2_5714	0.56	+0.3