Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5554

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
6,369,472	+		Pf6N2E2_5553	0.39	+0.5
6,369,472	+		Pf6N2E2_5553	0.39	-1.2
6,369,472	+		Pf6N2E2_5553	0.39	-0.0
6,369,472	+		Pf6N2E2_5553	0.39	+0.1
6,369,473	-		Pf6N2E2_5553	0.39	+0.1
6,369,473	-		Pf6N2E2_5553	0.39	-0.6
6,369,473	-		Pf6N2E2_5553	0.39	-0.3
6,369,473	-		Pf6N2E2_5553	0.39	+0.4
6,369,473	-		Pf6N2E2_5553	0.39	-0.2
6,369,607	+		Pf6N2E2_5553	0.52	+0.2
6,369,607	+		Pf6N2E2_5553	0.52	+0.5
6,369,607	+		Pf6N2E2_5553	0.52	-0.6
6,369,608	-		Pf6N2E2_5553	0.52	+1.2
6,369,608	-		Pf6N2E2_5553	0.52	+0.8
6,369,608	-		Pf6N2E2_5553	0.52	+0.7
6,369,608	-		Pf6N2E2_5553	0.52	-0.6
6,369,608	-		Pf6N2E2_5553	0.52	+0.0
6,369,657	+		Pf6N2E2_5553	0.57	+1.2
6,369,966	+		Pf6N2E2_5553	0.86	+0.5
6,370,152	+				-0.0
6,370,152	+				+0.3
6,370,153	-				+1.0
6,370,153	-				-0.4
6,370,153	-				+0.1
6,370,154	+				-0.3
6,370,154	+				-0.5
6,370,155	-				+0.5
6,370,155	-				+1.5
6,370,155	-				+0.4
6,370,155	-				-0.7
6,370,155	-				-0.3
6,370,189	+				+1.1
6,370,189	+				+0.4
6,370,189	+				+1.2
6,370,190	-				+0.7
6,370,260	+				+2.0
6,370,271	-				+0.4
6,370,288	+				+0.9
6,370,289	-				+1.9
6,370,289	-				+0.6
6,370,289	-				-0.7
6,370,391	+				+0.5
6,370,392	-				-0.3
6,370,437	+		Pf6N2E2_5554	0.18	+0.3
6,370,437	+		Pf6N2E2_5554	0.18	-0.5
6,370,438	-		Pf6N2E2_5554	0.18	+0.5
6,370,532	-		Pf6N2E2_5554	0.38	-2.2
6,370,712	+		Pf6N2E2_5554	0.74	-0.3
6,370,712	+		Pf6N2E2_5554	0.74	-2.6
6,370,712	+		Pf6N2E2_5554	0.74	-1.3
6,370,726	-		Pf6N2E2_5554	0.77	-1.2
6,370,760	+		Pf6N2E2_5554	0.84	-1.7
6,370,761	-		Pf6N2E2_5554	0.84	-0.6
6,370,874	+				+0.1
6,370,874	+				-0.0
6,370,874	+				-1.1
6,370,883	-				-0.2
6,370,898	-				+0.5
6,370,898	-				+0.1
6,370,915	+				+0.5
6,370,932	-				+0.2
6,370,942	+				+0.6
6,370,943	-				-0.8
6,371,083	-		Pf6N2E2_5555	0.72	-1.9
6,371,083	-		Pf6N2E2_5555	0.72	+0.5
6,371,197	+				+0.7
6,371,198	-				-0.4
6,371,220	+				+0.7
6,371,220	+				+2.0
6,371,220	+				-0.2
6,371,221	-				-1.0
6,371,221	-				+0.6
6,371,221	-				+0.4
6,371,221	-				-0.5
6,371,221	-				+0.4
6,371,241	+				+0.6
6,371,241	+				+1.4
6,371,242	-				-0.7
6,371,253	+				+0.1
6,371,253	+				+3.5
6,371,253	+				+0.2
6,371,254	-				-0.2
6,371,254	-				-0.3
6,371,254	-				-0.9
6,371,254	-				+2.0
6,371,258	+				-0.1
6,371,320	+				-0.8
6,371,377	+				+1.5
6,371,377	+				+0.8
6,371,378	-				-1.9
6,371,378	-				+1.2
6,371,378	-				-0.2
6,371,378	-				-0.7
6,371,378	-				+0.2
6,371,378	-				+0.1
6,371,378	-				-0.8
6,371,378	-				+0.3
6,371,378	-				-0.5
6,371,378	-				+0.7
6,371,378	-				+0.1
6,371,381	+				-1.2
6,371,381	+				+0.1
6,371,382	-				+0.2
6,371,382	-				+0.0
6,371,382	-				+1.5
6,371,401	-				+0.8
6,371,401	-				+0.3
6,371,413	-				-0.1
6,371,413	-				+0.6
6,371,413	-				-0.5
6,371,434	+				+0.5
6,371,434	+				+0.7
6,371,435	-				+1.1
6,371,435	-				-0.6
6,371,437	-				+0.1
6,371,437	-				+0.9
6,371,454	+				-0.1
6,371,454	+				-0.9
6,371,454	+				+0.9
6,371,487	-				+0.4
6,371,502	+				-0.7
6,371,503	-				+0.9
6,371,503	-				-1.5
6,371,519	-				-0.8
6,371,524	+				+0.1
6,371,525	-				+0.1
6,371,550	+				+0.7
6,371,550	+				-0.1
6,371,551	-				+1.5
6,371,580	-				+0.2
6,371,585	+				+1.1
6,371,585	+				+0.6
6,371,585	+				-0.1
6,371,586	-				+0.6
6,371,640	+				-0.5
6,371,640	+				+0.3
6,371,641	-				+0.9
6,371,764	+		Pf6N2E2_5556	0.20	-0.5
6,371,764	+		Pf6N2E2_5556	0.20	-0.6
6,371,764	+		Pf6N2E2_5556	0.20	+0.2
6,371,764	+		Pf6N2E2_5556	0.20	-1.0
6,371,765	-		Pf6N2E2_5556	0.20	-0.2
6,371,765	-		Pf6N2E2_5556	0.20	-0.2