Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5236

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
6,033,074	+		Pf6N2E2_5234	0.77	-0.2
6,033,075	-		Pf6N2E2_5234	0.77	-0.5
6,033,075	-		Pf6N2E2_5234	0.77	+0.0
6,033,249	+				+0.1
6,033,250	-				+0.6
6,033,280	+				-1.1
6,033,280	+				-0.6
6,033,430	+		Pf6N2E2_5235	0.10	+0.6
6,033,430	+		Pf6N2E2_5235	0.10	-0.4
6,033,430	+		Pf6N2E2_5235	0.10	-0.2
6,033,469	+		Pf6N2E2_5235	0.16	+0.2
6,033,469	+		Pf6N2E2_5235	0.16	+0.3
6,033,469	+		Pf6N2E2_5235	0.16	-0.0
6,033,469	+		Pf6N2E2_5235	0.16	-0.2
6,033,470	-		Pf6N2E2_5235	0.16	-1.4
6,033,470	-		Pf6N2E2_5235	0.16	-1.1
6,033,470	-		Pf6N2E2_5235	0.16	-0.0
6,033,470	-		Pf6N2E2_5235	0.16	-0.2
6,033,470	-		Pf6N2E2_5235	0.16	-0.1
6,033,470	-		Pf6N2E2_5235	0.16	-0.2
6,033,470	-		Pf6N2E2_5235	0.16	-1.1
6,033,470	-		Pf6N2E2_5235	0.16	-0.1
6,033,667	+		Pf6N2E2_5235	0.47	-1.0
6,033,667	+		Pf6N2E2_5235	0.47	+0.8
6,033,668	-		Pf6N2E2_5235	0.47	-0.8
6,033,668	-		Pf6N2E2_5235	0.47	-0.7
6,033,851	-		Pf6N2E2_5235	0.76	+0.8
6,033,851	-		Pf6N2E2_5235	0.76	-0.4
6,033,851	-		Pf6N2E2_5235	0.76	+0.2
6,033,851	-		Pf6N2E2_5235	0.76	+1.0
6,033,851	-		Pf6N2E2_5235	0.76	+0.6
6,033,883	+		Pf6N2E2_5235	0.81	-0.2
6,033,883	+		Pf6N2E2_5235	0.81	+0.2
6,033,884	-		Pf6N2E2_5235	0.81	-2.2
6,033,884	-		Pf6N2E2_5235	0.81	+0.8
6,033,884	-		Pf6N2E2_5235	0.81	-0.3
6,033,884	-		Pf6N2E2_5235	0.81	-0.4
6,033,884	-		Pf6N2E2_5235	0.81	+0.1
6,034,041	-				+0.8
6,034,045	+				+2.1
6,034,046	-				-0.1
6,034,050	+				+1.8
6,034,050	+				+0.7
6,034,050	+				+0.9
6,034,051	-				-0.3
6,034,051	-				+0.2
6,034,071	-				-1.4
6,034,077	+				+0.4
6,034,077	+				+0.4
6,034,078	-				+0.2
6,034,088	-		Pf6N2E2_5236	0.17	+0.1
6,034,088	-		Pf6N2E2_5236	0.17	-0.5
6,034,125	-		Pf6N2E2_5236	0.47	-1.3
6,034,125	-		Pf6N2E2_5236	0.47	-0.5
6,034,224	-				-0.0
6,034,383	-		Pf6N2E2_5237	0.38	-0.7
6,034,650	-		Pf6N2E2_5237	0.86	+0.8
6,034,650	-		Pf6N2E2_5237	0.86	-0.2
6,034,673	+				+0.5
6,034,673	+				-0.8
6,034,673	+				-0.7
6,034,673	+				+0.2
6,034,674	-				-1.0
6,034,674	-				-0.2
6,034,674	-				-0.0
6,034,724	+				+0.7
6,034,724	+				+0.1
6,034,724	+				-0.8
6,034,724	+				+0.4
6,034,725	-				-0.1
6,034,725	-				+1.2
6,034,816	+		Pf6N2E2_5238	0.18	-1.0
6,034,816	+		Pf6N2E2_5238	0.18	+0.2
6,034,817	-		Pf6N2E2_5238	0.18	+0.7
6,034,817	-		Pf6N2E2_5238	0.18	+1.5
6,034,877	+		Pf6N2E2_5238	0.31	+1.0
6,034,877	+		Pf6N2E2_5238	0.31	+0.1
6,034,877	+		Pf6N2E2_5238	0.31	-0.3
6,034,877	+		Pf6N2E2_5238	0.31	+0.6
6,034,878	-		Pf6N2E2_5238	0.31	+1.1
6,034,878	-		Pf6N2E2_5238	0.31	-0.8
6,034,878	-		Pf6N2E2_5238	0.31	+0.5
6,034,878	-		Pf6N2E2_5238	0.31	-0.5
6,035,042	+		Pf6N2E2_5238	0.66	+0.1