Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5076

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
5,851,245	+		Pf6N2E2_5074	0.82	-0.2
5,851,245	+		Pf6N2E2_5074	0.82	-0.0
5,851,245	+		Pf6N2E2_5074	0.82	-0.2
5,851,246	-		Pf6N2E2_5074	0.82	+0.4
5,851,326	+		Pf6N2E2_5074	0.87	-1.6
5,851,432	-				-0.1
5,851,432	-				+1.2
5,851,450	-				-0.1
5,851,625	-				+0.1
5,851,625	-				-0.0
5,851,661	+				+0.7
5,851,691	+				+0.6
5,851,691	+				-0.7
5,851,730	+		Pf6N2E2_5075	0.16	-0.7
5,851,731	-		Pf6N2E2_5075	0.16	+1.6
5,851,750	+		Pf6N2E2_5075	0.20	-0.7
5,851,750	+		Pf6N2E2_5075	0.20	+0.6
5,851,753	+		Pf6N2E2_5075	0.20	-0.8
5,851,753	+		Pf6N2E2_5075	0.20	-0.3
5,851,754	-		Pf6N2E2_5075	0.20	-0.9
5,851,800	+		Pf6N2E2_5075	0.29	-0.9
5,851,801	-		Pf6N2E2_5075	0.29	+0.3
5,851,813	+		Pf6N2E2_5075	0.31	-0.4
5,851,843	+		Pf6N2E2_5075	0.36	+0.3
5,851,843	+		Pf6N2E2_5075	0.36	-1.1
5,851,868	-		Pf6N2E2_5075	0.41	+0.2
5,851,868	-		Pf6N2E2_5075	0.41	-0.8
5,851,868	-		Pf6N2E2_5075	0.41	+0.5
5,851,868	-		Pf6N2E2_5075	0.41	+0.4
5,851,942	-		Pf6N2E2_5075	0.54	-0.3
5,851,942	-		Pf6N2E2_5075	0.54	-0.4
5,852,056	+		Pf6N2E2_5075	0.75	-0.4
5,852,056	+		Pf6N2E2_5075	0.75	-1.3
5,852,056	+		Pf6N2E2_5075	0.75	-0.1
5,852,056	+		Pf6N2E2_5075	0.75	+0.1
5,852,056	+		Pf6N2E2_5075	0.75	+0.5
5,852,056	-		Pf6N2E2_5075	0.75	+0.6
5,852,057	-		Pf6N2E2_5075	0.75	-0.5
5,852,057	-		Pf6N2E2_5075	0.75	+1.1
5,852,057	-		Pf6N2E2_5075	0.75	+1.4
5,852,057	-		Pf6N2E2_5075	0.75	-0.6
5,852,057	-		Pf6N2E2_5075	0.75	-1.0
5,852,057	-		Pf6N2E2_5075	0.75	+0.4
5,852,057	-		Pf6N2E2_5075	0.75	+1.1
5,852,057	-		Pf6N2E2_5075	0.75	-0.0
5,852,258	+				-1.6
5,852,259	-				-0.9
5,852,259	-				-0.4
5,852,259	-				-0.1
5,852,259	-				+0.1
5,852,502	+		Pf6N2E2_5076	0.19	+1.1
5,852,503	-		Pf6N2E2_5076	0.19	-1.3
5,852,603	+		Pf6N2E2_5076	0.27	-1.2
5,852,604	-		Pf6N2E2_5076	0.27	-1.1
5,852,604	-		Pf6N2E2_5076	0.27	-0.5
5,852,604	-		Pf6N2E2_5076	0.27	-2.2
5,852,877	+		Pf6N2E2_5076	0.47	-1.8
5,852,878	-		Pf6N2E2_5076	0.47	-2.0
5,852,948	+		Pf6N2E2_5076	0.52	-1.0
5,852,948	+		Pf6N2E2_5076	0.52	-0.5
5,853,327	+		Pf6N2E2_5076	0.80	+0.8
5,853,328	-		Pf6N2E2_5076	0.80	-0.9
5,853,608	+				-0.5
5,853,645	-				-1.7
5,853,645	-				+0.6
5,853,645	-				+0.6
5,853,645	-				-0.4
5,853,645	-				-0.4
5,853,663	+				+0.1
5,853,663	+				+0.8
5,853,664	-				+0.8
5,853,690	+				+0.5
5,853,690	+				+0.9
5,853,690	+				+0.9
5,853,690	+				+0.5
5,853,691	-				+0.3
5,853,697	+				+0.1
5,853,764	+				-0.1
5,853,765	-				+0.6
5,853,765	-				+1.0
5,853,873	-		Pf6N2E2_5077	0.21	+0.5
5,853,873	-		Pf6N2E2_5077	0.21	-1.2
5,853,873	-		Pf6N2E2_5077	0.21	+0.9
5,853,873	-		Pf6N2E2_5077	0.21	+0.6
5,853,985	+		Pf6N2E2_5077	0.53	+0.7
5,854,131	-				+0.4
5,854,131	-				+0.3
5,854,154	+				+0.4
5,854,182	+				+0.1
5,854,182	+				+0.3
5,854,183	-				+0.2
5,854,184	+				-0.2
5,854,184	+				+1.3
5,854,184	+				-0.3
5,854,184	+				-2.3
5,854,184	+				-0.6
5,854,184	+				-0.2
5,854,184	+				+0.4
5,854,185	-				+0.2
5,854,185	-				-0.9
5,854,185	-				+1.0
5,854,185	-				+0.6
5,854,185	-				+0.3
5,854,185	-				+0.4
5,854,185	-				-1.0
5,854,185	-				+0.5
5,854,185	-				-0.1
5,854,185	-				-0.1
5,854,185	-				+0.6
5,854,185	-				+1.0
5,854,305	-				+0.2
5,854,306	+				+1.0
5,854,306	+				+0.6
5,854,322	+				+0.9
5,854,322	+				-1.5
5,854,322	+				+0.6
5,854,323	-				+0.5
5,854,323	-				+0.1
5,854,323	-				+0.7
5,854,323	-				+0.6
5,854,323	-				+0.6
5,854,323	-				+0.3
5,854,323	-				-0.8
5,854,325	+				+2.2
5,854,326	-				+1.3
5,854,326	-				+0.4
5,854,326	-				-2.4
5,854,326	-				+1.8
5,854,342	+				-0.3
5,854,342	+				+0.0
5,854,343	-				+0.3
5,854,343	-				+0.5
5,854,343	-				-1.8
5,854,352	-				+0.2
5,854,366	+				+0.1
5,854,367	-				+0.5
5,854,424	-				+0.4
5,854,453	-				-0.6
5,854,453	-				-0.7
5,854,453	-				+0.3
5,854,471	-				+1.2
5,854,474	-				+0.3
5,854,474	-				-0.3
5,854,474	-				+0.7
5,854,474	-				+0.1