Experiment: D-Cycloserine 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4791 and Pf6N2E2_4792 are separated by 67 nucleotides Pf6N2E2_4792 and Pf6N2E2_4793 are separated by 479 nucleotides Pf6N2E2_4793 and Pf6N2E2_4794 are separated by 199 nucleotides
Pf6N2E2_4791 - RNA polymerase sigma factor RpoD, at 5,539,048 to 5,540,895
_4791
Pf6N2E2_4792 - DNA primase (EC 2.7.7.-), at 5,540,963 to 5,542,921
_4792
Pf6N2E2_4793 - SSU ribosomal protein S21p, at 5,543,401 to 5,543,616
_4793
Pf6N2E2_4794 - TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 5,543,816 to 5,544,841
_4794
Position (kb)
5540
5541
5542
5543 Strain fitness (log2 ratio)
-1
0
1 at 5542.949 kb on - strand at 5543.047 kb on - strand at 5543.047 kb on - strand at 5543.047 kb on - strand at 5543.047 kb on - strand at 5543.047 kb on - strand at 5543.047 kb on - strand at 5543.047 kb on - strand at 5543.071 kb on - strand at 5543.074 kb on - strand at 5543.074 kb on - strand at 5543.074 kb on - strand at 5543.074 kb on - strand at 5543.074 kb on - strand at 5543.078 kb on - strand at 5543.078 kb on - strand at 5543.078 kb on - strand at 5543.078 kb on - strand at 5543.078 kb on - strand at 5543.078 kb on - strand at 5543.078 kb on - strand at 5543.084 kb on - strand at 5543.292 kb on - strand at 5543.292 kb on - strand at 5543.292 kb on - strand at 5543.292 kb on - strand at 5543.292 kb on - strand at 5543.332 kb on - strand at 5543.772 kb on + strand at 5543.772 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.12 mg/ml remove 5,542,949 - +0.7 5,543,047 - +0.7 5,543,047 - +0.8 5,543,047 - +0.6 5,543,047 - +0.8 5,543,047 - +0.7 5,543,047 - -0.5 5,543,047 - -0.1 5,543,071 - +0.4 5,543,074 - +0.4 5,543,074 - +0.4 5,543,074 - +1.0 5,543,074 - -0.3 5,543,074 - -0.6 5,543,078 - +0.0 5,543,078 - +0.5 5,543,078 - +0.6 5,543,078 - -0.4 5,543,078 - +0.7 5,543,078 - +0.9 5,543,078 - +0.5 5,543,084 - +0.2 5,543,292 - -1.0 5,543,292 - +0.0 5,543,292 - +0.5 5,543,292 - -0.8 5,543,292 - +0.2 5,543,332 - -0.4 5,543,772 + -0.0 5,543,772 + -1.1
Or see this region's nucleotide sequence