Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4187

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
4,871,305	+		Pf6N2E2_4186	0.20	+0.4
4,871,305	+		Pf6N2E2_4186	0.20	+0.2
4,871,305	+		Pf6N2E2_4186	0.20	+1.5
4,871,305	+		Pf6N2E2_4186	0.20	-1.0
4,871,305	+		Pf6N2E2_4186	0.20	+0.4
4,871,306	-		Pf6N2E2_4186	0.20	-0.5
4,871,306	-		Pf6N2E2_4186	0.20	+0.5
4,871,306	-		Pf6N2E2_4186	0.20	+0.4
4,871,306	-		Pf6N2E2_4186	0.20	-0.1
4,871,306	-		Pf6N2E2_4186	0.20	-0.1
4,871,306	-		Pf6N2E2_4186	0.20	+0.9
4,871,403	-		Pf6N2E2_4186	0.30	+0.0
4,871,498	+		Pf6N2E2_4186	0.39	+0.1
4,871,499	-		Pf6N2E2_4186	0.39	+1.8
4,871,527	+		Pf6N2E2_4186	0.42	+0.5
4,871,587	+		Pf6N2E2_4186	0.47	-1.0
4,871,587	+		Pf6N2E2_4186	0.47	+0.3
4,871,587	+		Pf6N2E2_4186	0.47	-0.4
4,871,656	-		Pf6N2E2_4186	0.54	+0.3
4,871,656	-		Pf6N2E2_4186	0.54	-0.6
4,871,735	-		Pf6N2E2_4186	0.61	+0.4
4,871,765	+		Pf6N2E2_4186	0.64	+0.9
4,871,862	-		Pf6N2E2_4186	0.74	-2.3
4,872,072	-				-0.2
4,872,088	+				-0.0
4,872,088	+				+0.6
4,872,089	-				+1.0
4,872,238	+				-0.4
4,872,307	-				-2.0
4,872,360	+				-0.7
4,872,361	-				-0.3
4,872,384	+				-1.5
4,872,438	+		Pf6N2E2_4187	0.15	+0.0
4,872,438	+		Pf6N2E2_4187	0.15	-2.2
4,872,438	+		Pf6N2E2_4187	0.15	+0.6
4,872,438	+				+0.6
4,872,438	+		Pf6N2E2_4187	0.15	-0.5
4,872,438	+		Pf6N2E2_4187	0.15	-1.4
4,872,439	-		Pf6N2E2_4187	0.15	-1.1
4,872,439	-		Pf6N2E2_4187	0.15	-2.2
4,872,439	-		Pf6N2E2_4187	0.15	-1.7
4,872,439	-		Pf6N2E2_4187	0.15	-0.1
4,872,439	-		Pf6N2E2_4187	0.15	-1.0
4,872,439	-		Pf6N2E2_4187	0.15	-1.7
4,872,798	+		Pf6N2E2_4187	0.56	-1.7
4,872,799	-		Pf6N2E2_4187	0.56	-0.8
4,872,799	-		Pf6N2E2_4187	0.56	-2.4
4,873,206	+				-1.0
4,873,207	-				-1.2
4,873,207	-				-0.0
4,873,315	+		Pf6N2E2_4188	0.16	+0.5
4,873,437	-		Pf6N2E2_4188	0.39	+1.1
4,873,609	+		Pf6N2E2_4188	0.72	+0.6
4,873,610	-		Pf6N2E2_4188	0.73	+0.7
4,873,744	+				+0.9
4,873,744	+				-0.4
4,873,745	-				+1.8
4,873,753	+				-0.5
4,873,754	-				+0.7
4,873,754	-				-0.6
4,873,754	-				-0.9
4,873,791	-				-0.7
4,873,791	-				+0.5
4,873,791	-				-0.5