Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4168

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
4,849,315	+		Pf6N2E2_4167	0.27	+0.6
4,849,315	+		Pf6N2E2_4167	0.27	-0.3
4,849,315	+		Pf6N2E2_4167	0.27	+0.4
4,849,316	-		Pf6N2E2_4167	0.27	-0.3
4,849,317	+		Pf6N2E2_4167	0.27	+0.1
4,849,317	+		Pf6N2E2_4167	0.27	+1.1
4,849,318	-		Pf6N2E2_4167	0.28	+0.5
4,849,318	-		Pf6N2E2_4167	0.28	-0.6
4,849,490	+		Pf6N2E2_4167	0.50	+1.2
4,849,490	+		Pf6N2E2_4167	0.50	-0.5
4,849,582	+		Pf6N2E2_4167	0.61	+0.2
4,849,583	-		Pf6N2E2_4167	0.61	+0.3
4,849,697	+		Pf6N2E2_4167	0.76	-0.7
4,849,697	+		Pf6N2E2_4167	0.76	-0.1
4,849,697	+		Pf6N2E2_4167	0.76	+0.3
4,849,697	+		Pf6N2E2_4167	0.76	-1.0
4,849,698	-		Pf6N2E2_4167	0.76	+0.3
4,849,698	-		Pf6N2E2_4167	0.76	-0.4
4,849,698	-		Pf6N2E2_4167	0.76	-0.4
4,849,698	-		Pf6N2E2_4167	0.76	+0.3
4,849,698	-		Pf6N2E2_4167	0.76	+0.2
4,849,698	-		Pf6N2E2_4167	0.76	+0.5
4,849,698	-		Pf6N2E2_4167	0.76	-0.3
4,849,698	-		Pf6N2E2_4167	0.76	-0.4
4,849,698	-		Pf6N2E2_4167	0.76	-0.8
4,849,698	-		Pf6N2E2_4167	0.76	-0.4
4,849,698	-		Pf6N2E2_4167	0.76	+1.4
4,849,783	+		Pf6N2E2_4167	0.87	-0.3
4,849,783	+		Pf6N2E2_4167	0.87	-0.3
4,849,783	+		Pf6N2E2_4167	0.87	+0.7
4,849,783	+		Pf6N2E2_4167	0.87	+0.5
4,849,784	-		Pf6N2E2_4167	0.87	+0.5
4,849,784	-		Pf6N2E2_4167	0.87	+1.3
4,849,896	-				-0.0
4,849,896	-				+2.6
4,849,973	+		Pf6N2E2_4168	0.12	-2.4
4,849,973	+		Pf6N2E2_4168	0.12	-1.6
4,850,085	+		Pf6N2E2_4168	0.26	+0.1
4,850,085	+		Pf6N2E2_4168	0.26	-1.0
4,850,086	-		Pf6N2E2_4168	0.26	-1.2
4,850,175	+		Pf6N2E2_4168	0.38	-1.5
4,850,176	-		Pf6N2E2_4168	0.38	-1.0
4,850,178	+		Pf6N2E2_4168	0.38	-1.2
4,850,178	+		Pf6N2E2_4168	0.38	+1.8
4,850,178	+		Pf6N2E2_4168	0.38	-1.7
4,850,178	+		Pf6N2E2_4168	0.38	-0.6
4,850,179	-		Pf6N2E2_4168	0.38	+1.0
4,850,179	-		Pf6N2E2_4168	0.38	-0.1
4,850,179	-		Pf6N2E2_4168	0.38	+0.4
4,850,179	-		Pf6N2E2_4168	0.38	+0.5
4,850,216	+		Pf6N2E2_4168	0.43	-1.5
4,850,216	+		Pf6N2E2_4168	0.43	-3.5
4,850,217	-		Pf6N2E2_4168	0.43	-1.3
4,850,217	-		Pf6N2E2_4168	0.43	+0.6
4,850,217	-		Pf6N2E2_4168	0.43	-0.7
4,850,217	-		Pf6N2E2_4168	0.43	+0.2
4,850,217	-		Pf6N2E2_4168	0.43	+0.4
4,850,217	-		Pf6N2E2_4168	0.43	-0.6
4,850,452	+		Pf6N2E2_4168	0.73	-0.6
4,850,453	-		Pf6N2E2_4168	0.73	-1.7
4,850,647	-				+0.6
4,850,663	+				-0.9
4,850,663	+				+0.1
4,850,663	+				-0.7
4,850,688	+				-0.2
4,850,688	+				-0.2
4,850,688	+				+0.3
4,850,688	+				-1.4
4,850,771	+				-0.2
4,850,772	-				+0.5
4,850,919	+		Pf6N2E2_4169	0.30	-1.1
4,850,943	+		Pf6N2E2_4169	0.34	+1.3
4,850,943	+		Pf6N2E2_4169	0.34	-0.2
4,850,944	-		Pf6N2E2_4169	0.34	+0.2
4,850,944	-		Pf6N2E2_4169	0.34	+0.9
4,850,944	-		Pf6N2E2_4169	0.34	-0.5
4,851,188	-		Pf6N2E2_4169	0.68	+1.3
4,851,196	+		Pf6N2E2_4169	0.69	-0.4
4,851,196	+		Pf6N2E2_4169	0.69	-0.3
4,851,196	+		Pf6N2E2_4169	0.69	+0.6
4,851,246	+		Pf6N2E2_4169	0.76	-0.7
4,851,247	-		Pf6N2E2_4169	0.76	-1.0
4,851,247	-		Pf6N2E2_4169	0.76	+0.6
4,851,247	-		Pf6N2E2_4169	0.76	-0.0
4,851,247	-		Pf6N2E2_4169	0.76	-0.1
4,851,289	-		Pf6N2E2_4169	0.82	+1.1
4,851,407	+				+1.0
4,851,407	+				+0.2
4,851,407	+				-1.1
4,851,407	+				+1.0
4,851,407	+				-0.1
4,851,408	-				+0.1
4,851,414	+				-0.3
4,851,414	+				+0.1
4,851,535	+				+0.9
4,851,542	-				+0.9