Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3899

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
4,531,405	+		Pf6N2E2_3897	0.58	+0.3
4,531,406	-		Pf6N2E2_3897	0.58	+0.4
4,531,406	-		Pf6N2E2_3897	0.58	+0.4
4,531,406	-		Pf6N2E2_3897	0.58	-0.3
4,531,458	+		Pf6N2E2_3897	0.78	+1.1
4,531,458	+		Pf6N2E2_3897	0.78	+0.9
4,531,459	-		Pf6N2E2_3897	0.78	+1.3
4,531,459	-		Pf6N2E2_3897	0.78	+0.4
4,531,459	-		Pf6N2E2_3897	0.78	-0.0
4,531,459	-		Pf6N2E2_3897	0.78	+0.6
4,531,459	-		Pf6N2E2_3897	0.78	+0.7
4,531,515	+				+0.1
4,531,519	+				-0.1
4,531,520	-				+1.5
4,531,529	+				+0.9
4,531,731	+				-0.0
4,531,731	+				+0.5
4,531,731	+				+0.4
4,531,731	+				+0.4
4,531,796	+				-0.5
4,531,861	+				+0.4
4,531,862	-				+0.6
4,532,107	+		Pf6N2E2_3898	0.56	+0.2
4,532,108	-		Pf6N2E2_3898	0.56	+0.3
4,532,122	+		Pf6N2E2_3898	0.60	-1.0
4,532,123	-		Pf6N2E2_3898	0.60	+0.2
4,532,123	-		Pf6N2E2_3898	0.60	+0.2
4,532,182	-		Pf6N2E2_3898	0.77	-0.6
4,532,182	-		Pf6N2E2_3898	0.77	+1.9
4,532,209	+		Pf6N2E2_3898	0.85	+0.0
4,532,209	+		Pf6N2E2_3898	0.85	+0.2
4,532,209	+		Pf6N2E2_3898	0.85	+0.4
4,532,209	+		Pf6N2E2_3898	0.85	-0.5
4,532,209	+		Pf6N2E2_3898	0.85	-0.2
4,532,209	+		Pf6N2E2_3898	0.85	-0.1
4,532,210	-		Pf6N2E2_3898	0.85	+0.7
4,532,210	-		Pf6N2E2_3898	0.85	-0.6
4,532,210	-		Pf6N2E2_3898	0.85	+0.1
4,532,210	-		Pf6N2E2_3898	0.85	-0.0
4,532,239	-				+0.1
4,532,267	+				+0.6
4,532,268	-				+1.7
4,532,268	-				-1.0
4,532,331	+				-2.8
4,532,331	+				+0.3
4,532,331	+				+0.2
4,532,331	+				+0.6
4,532,331	+				-0.4
4,532,332	-				+1.0
4,532,332	-				-0.1
4,532,332	-				-0.0
4,532,332	-				-1.1
4,532,646	+		Pf6N2E2_3899	0.20	-0.9
4,532,799	+		Pf6N2E2_3899	0.30	-0.1
4,532,800	-		Pf6N2E2_3899	0.30	-0.9
4,533,102	+		Pf6N2E2_3899	0.50	+0.1
4,533,480	+		Pf6N2E2_3899	0.74	-0.1
4,533,480	+		Pf6N2E2_3899	0.74	-0.5
4,533,480	+		Pf6N2E2_3899	0.74	-2.5
4,533,481	-		Pf6N2E2_3899	0.74	+0.1
4,533,481	-		Pf6N2E2_3899	0.74	-0.1
4,533,481	-		Pf6N2E2_3899	0.74	-0.5
4,533,481	-		Pf6N2E2_3899	0.74	-1.4
4,533,559	-		Pf6N2E2_3899	0.80	-2.1
4,533,559	-		Pf6N2E2_3899	0.80	+1.9
4,533,578	+		Pf6N2E2_3899	0.81	-1.8
4,533,579	-		Pf6N2E2_3899	0.81	-0.6
4,533,579	-		Pf6N2E2_3899	0.81	-0.9
4,533,579	-		Pf6N2E2_3899	0.81	+0.0
4,533,579	-		Pf6N2E2_3899	0.81	-0.4
4,533,579	-		Pf6N2E2_3899	0.81	-0.3
4,533,579	-		Pf6N2E2_3899	0.81	-0.3
4,533,618	+		Pf6N2E2_3899	0.83	-0.9
4,533,618	+		Pf6N2E2_3899	0.83	+0.6
4,533,618	+		Pf6N2E2_3899	0.83	-1.4
4,533,619	-		Pf6N2E2_3899	0.83	-0.9
4,533,619	-		Pf6N2E2_3899	0.83	-0.9
4,533,760	+				-1.0
4,533,849	+				+1.0
4,533,850	-				+0.1
4,533,850	-				-0.4
4,533,850	-				-0.4
4,533,850	-				+0.1
4,533,860	-				-0.4
4,533,918	+				-0.9
4,533,918	+				-0.9
4,533,919	-				+0.2
4,533,919	-				-0.6
4,533,919	-				-0.8
4,533,921	+				-1.4
4,533,921	+				-1.8
4,533,936	+				+0.0
4,533,937	-				-1.8
4,533,937	-				-1.7
4,533,939	+				+0.4
4,533,962	+				-1.3
4,533,962	+				-1.8
4,534,010	+				+0.4
4,534,064	+				-0.0
4,534,065	-				+0.9