Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3870

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
4,500,871	+				+0.8
4,500,872	-				+0.1
4,500,872	-				+0.4
4,500,919	+				-0.6
4,500,919	+				+0.5
4,500,919	+				-0.1
4,500,920	-				-0.7
4,500,920	-				-0.1
4,500,920	-				+0.0
4,500,920	-				-0.3
4,500,920	-				+0.3
4,500,927	+				+1.8
4,500,927	+				-0.5
4,500,927	+				-0.6
4,500,927	+				+0.3
4,500,927	+				+0.4
4,500,927	+				-0.1
4,500,928	-				+0.4
4,500,928	-				-0.1
4,500,928	-				+0.7
4,500,928	-				-0.8
4,500,928	-				+0.5
4,500,949	+				+1.1
4,500,950	-				+0.9
4,500,950	-				+1.8
4,500,972	+				+1.1
4,500,972	+				-2.1
4,500,973	-				+0.4
4,500,973	-				+0.7
4,500,973	-				+0.8
4,500,973	-				+0.6
4,501,037	-				-1.1
4,501,037	-				+0.3
4,501,037	-				+0.2
4,501,055	+				-0.0
4,501,056	-				+1.2
4,501,163	+				-0.4
4,501,163	+				-0.7
4,501,163	+				-0.4
4,501,163	+				-0.6
4,501,164	-				+1.0
4,501,164	-				-0.0
4,501,164	-				+0.8
4,501,164	-				+0.3
4,501,305	+		Pf6N2E2_3869	0.23	+0.4
4,501,305	+		Pf6N2E2_3869	0.23	+0.8
4,501,305	+		Pf6N2E2_3869	0.23	-0.6
4,501,305	+		Pf6N2E2_3869	0.23	+1.0
4,501,305	+		Pf6N2E2_3869	0.23	+1.0
4,501,305	+		Pf6N2E2_3869	0.23	-1.0
4,501,305	+		Pf6N2E2_3869	0.23	+0.1
4,501,306	-		Pf6N2E2_3869	0.23	+0.7
4,501,306	-		Pf6N2E2_3869	0.23	+0.2
4,501,306	-		Pf6N2E2_3869	0.23	-0.8
4,501,306	-		Pf6N2E2_3869	0.23	+0.0
4,501,306	-		Pf6N2E2_3869	0.23	+0.0
4,501,306	-		Pf6N2E2_3869	0.23	+0.1
4,501,306	-		Pf6N2E2_3869	0.23	+0.2
4,501,306	-		Pf6N2E2_3869	0.23	+0.8
4,501,306	-		Pf6N2E2_3869	0.23	-0.4
4,501,329	+		Pf6N2E2_3869	0.26	-1.4
4,501,329	+		Pf6N2E2_3869	0.26	+1.4
4,501,342	-		Pf6N2E2_3869	0.28	-1.9
4,501,342	-		Pf6N2E2_3869	0.28	+0.9
4,501,362	+		Pf6N2E2_3869	0.31	-0.4
4,501,373	+		Pf6N2E2_3869	0.32	+0.2
4,501,373	+		Pf6N2E2_3869	0.32	-0.4
4,501,373	+		Pf6N2E2_3869	0.32	-2.0
4,501,373	+		Pf6N2E2_3869	0.32	-1.6
4,501,373	+		Pf6N2E2_3869	0.32	-0.2
4,501,373	+		Pf6N2E2_3869	0.32	+2.4
4,501,373	+		Pf6N2E2_3869	0.32	+1.0
4,501,374	-		Pf6N2E2_3869	0.32	+0.1
4,501,374	-		Pf6N2E2_3869	0.32	+1.4
4,501,374	-		Pf6N2E2_3869	0.32	+0.4
4,501,374	-		Pf6N2E2_3869	0.32	+1.6
4,501,569	+		Pf6N2E2_3869	0.60	+0.0
4,501,569	+		Pf6N2E2_3869	0.60	-0.8
4,501,569	+		Pf6N2E2_3869	0.60	-0.3
4,501,569	+		Pf6N2E2_3869	0.60	+1.1
4,501,570	-		Pf6N2E2_3869	0.60	+0.9
4,501,570	-		Pf6N2E2_3869	0.60	+0.4
4,501,570	-		Pf6N2E2_3869	0.60	+0.3
4,501,570	-		Pf6N2E2_3869	0.60	+0.6
4,501,612	+		Pf6N2E2_3869	0.66	+0.9
4,501,612	+		Pf6N2E2_3869	0.66	-0.1
4,501,771	-		Pf6N2E2_3869	0.88	-2.1
4,501,771	-		Pf6N2E2_3869	0.88	+0.9
4,501,805	-				+0.2
4,501,855	+				+0.2
4,501,855	+				-0.6
4,501,855	+				-0.2
4,501,856	-				+0.1
4,501,856	-				+0.6
4,501,932	+		Pf6N2E2_3870	0.18	-0.4
4,501,933	-		Pf6N2E2_3870	0.18	-1.0
4,501,933	-		Pf6N2E2_3870	0.18	+1.6
4,502,130	-		Pf6N2E2_3870	0.63	-0.5
4,502,406	+		Pf6N2E2_3871	0.14	+1.1
4,502,406	+		Pf6N2E2_3871	0.14	+1.3
4,502,406	+		Pf6N2E2_3871	0.14	+0.4
4,502,407	-		Pf6N2E2_3871	0.14	+0.5
4,502,407	-		Pf6N2E2_3871	0.14	-0.5
4,502,457	+		Pf6N2E2_3871	0.21	+0.8
4,502,457	+		Pf6N2E2_3871	0.21	+1.0
4,502,458	-		Pf6N2E2_3871	0.21	-0.3
4,502,494	-		Pf6N2E2_3871	0.26	+0.3
4,502,682	+		Pf6N2E2_3871	0.51	+0.7
4,502,778	+		Pf6N2E2_3871	0.64	+0.6
4,502,778	+		Pf6N2E2_3871	0.64	+1.5
4,502,778	+		Pf6N2E2_3871	0.64	-0.4
4,502,778	+		Pf6N2E2_3871	0.64	-0.1
4,502,778	+		Pf6N2E2_3871	0.64	-2.1
4,502,778	+		Pf6N2E2_3871	0.64	+0.6
4,502,778	+		Pf6N2E2_3871	0.64	+0.3
4,502,778	+		Pf6N2E2_3871	0.64	-0.0
4,502,778	+		Pf6N2E2_3871	0.64	-1.1
4,502,778	+		Pf6N2E2_3871	0.64	+0.4
4,502,778	+		Pf6N2E2_3871	0.64	+0.6
4,502,778	+		Pf6N2E2_3871	0.64	+1.1
4,502,778	+		Pf6N2E2_3871	0.64	+0.1
4,502,779	-		Pf6N2E2_3871	0.64	+0.6
4,502,779	-		Pf6N2E2_3871	0.64	-0.1
4,502,779	-		Pf6N2E2_3871	0.64	-0.0
4,502,779	-		Pf6N2E2_3871	0.64	+1.2
4,502,779	-		Pf6N2E2_3871	0.64	+0.6
4,502,779	-		Pf6N2E2_3871	0.64	-0.8
4,502,779	-		Pf6N2E2_3871	0.64	+0.1
4,502,779	-		Pf6N2E2_3871	0.64	+0.3
4,502,779	-		Pf6N2E2_3871	0.64	+0.8
4,502,779	-		Pf6N2E2_3871	0.64	+0.4
4,502,779	-		Pf6N2E2_3871	0.64	+0.8
4,502,805	+		Pf6N2E2_3871	0.67	-0.3
4,502,805	+		Pf6N2E2_3871	0.67	+1.3
4,502,806	-		Pf6N2E2_3871	0.67	-0.7
4,502,806	-		Pf6N2E2_3871	0.67	-0.4
4,502,806	-		Pf6N2E2_3871	0.67	+0.0
4,502,806	-		Pf6N2E2_3871	0.67	+1.3
4,502,806	-		Pf6N2E2_3871	0.67	+0.1
4,502,806	-		Pf6N2E2_3871	0.67	+1.3
4,502,842	+		Pf6N2E2_3871	0.72	-0.0
4,502,842	+		Pf6N2E2_3871	0.72	+1.1
4,502,843	-				+1.6
4,502,850	+		Pf6N2E2_3871	0.73	+0.8
4,502,851	-		Pf6N2E2_3871	0.73	+1.4
4,502,851	-		Pf6N2E2_3871	0.73	+1.6
4,502,865	+		Pf6N2E2_3871	0.75	+1.0
4,502,901	+		Pf6N2E2_3871	0.80	-0.2
4,502,902	-		Pf6N2E2_3871	0.80	+0.2
4,502,902	-		Pf6N2E2_3871	0.80	+0.8
4,502,904	+		Pf6N2E2_3871	0.80	+0.3
4,502,904	+		Pf6N2E2_3871	0.80	+0.2
4,502,904	+		Pf6N2E2_3871	0.80	-1.5
4,502,904	+		Pf6N2E2_3871	0.80	+1.3
4,502,905	-		Pf6N2E2_3871	0.81	+0.4
4,502,905	-		Pf6N2E2_3871	0.81	+0.7
4,502,905	-		Pf6N2E2_3871	0.81	+0.3
4,502,905	-		Pf6N2E2_3871	0.81	-0.2
4,502,905	-		Pf6N2E2_3871	0.81	-0.3
4,502,905	-		Pf6N2E2_3871	0.81	+1.4
4,502,967	+		Pf6N2E2_3871	0.89	-0.7
4,502,968	-		Pf6N2E2_3871	0.89	-0.3
4,503,000	+				+0.3
4,503,000	+				+0.2
4,503,000	+				+1.4
4,503,000	+				-0.2
4,503,001	-				+0.6
4,503,001	-				-0.4
4,503,001	-				+0.0
4,503,056	+				-0.8
4,503,056	+				+0.7
4,503,057	-				-0.2
4,503,057	-				+1.1
4,503,081	+				+0.9
4,503,082	-				+1.0
4,503,086	+				+0.6
4,503,086	+				+0.1
4,503,086	+				-0.2
4,503,086	+				-0.7
4,503,086	+				+0.4
4,503,086	+				-0.8
4,503,087	-				-3.1
4,503,087	-				-3.3
4,503,089	+				+0.1
4,503,089	+				-0.8
4,503,102	+				+0.2
4,503,102	+				+0.8
4,503,118	+				+2.1
4,503,118	+				+0.7
4,503,119	-				+0.2
4,503,169	+		Pf6N2E2_3872	0.44	+1.0
4,503,169	+		Pf6N2E2_3872	0.44	-0.4
4,503,170	-		Pf6N2E2_3872	0.45	-0.2
4,503,170	-		Pf6N2E2_3872	0.45	-0.3
4,503,255	+				+0.6
4,503,256	-				-0.9
4,503,256	-				+0.1
4,503,259	+				-0.3
4,503,259	+				-0.2
4,503,260	-				-0.4
4,503,260	-				-0.9