Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3499

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
4,078,608	-		Pf6N2E2_3497	0.39	+0.4
4,078,628	+		Pf6N2E2_3497	0.42	+0.5
4,078,629	-		Pf6N2E2_3497	0.42	+0.1
4,078,739	+		Pf6N2E2_3497	0.57	-0.2
4,078,739	+		Pf6N2E2_3497	0.57	+0.1
4,078,739	+		Pf6N2E2_3497	0.57	+0.1
4,078,740	-		Pf6N2E2_3497	0.57	+0.8
4,079,010	-				+0.2
4,079,149	+		Pf6N2E2_3498	0.30	-1.7
4,079,149	+		Pf6N2E2_3498	0.30	-0.8
4,079,150	-		Pf6N2E2_3498	0.30	-0.0
4,079,150	-		Pf6N2E2_3498	0.30	-0.7
4,079,384	+				+2.0
4,079,384	+				+1.1
4,079,385	-				+0.8
4,079,475	+				+0.7
4,079,727	-		Pf6N2E2_3499	0.68	-0.1
4,079,727	-		Pf6N2E2_3499	0.68	-2.1
4,079,727	-		Pf6N2E2_3499	0.68	-0.8
4,079,820	-				-0.6
4,079,820	-				+0.7
4,079,820	-				-0.7
4,079,869	+				+0.7
4,079,869	+				-0.8
4,079,869	+				-0.2
4,079,940	+				-0.1
4,079,940	+				+1.0
4,079,940	+				+0.1
4,079,940	+				+0.5
4,079,940	+				+0.1
4,079,940	+				+1.3
4,079,940	+				+0.8
4,079,940	+				+1.4
4,079,940	+				-0.0
4,079,941	-				-0.2
4,079,941	-				+0.4
4,079,941	-				-0.1
4,079,941	-				+0.2
4,079,941	-				+0.6
4,079,941	-				+0.4
4,079,941	-				+0.2
4,079,941	-				+0.5
4,079,941	-				+0.8
4,079,941	-				+0.4
4,079,941	-				+0.1
4,079,942	+				+0.8
4,079,942	+				-0.5
4,079,942	+				-0.4
4,079,943	-				-0.9
4,079,943	-				+1.1
4,079,943	-				+0.4
4,079,943	-				-1.5
4,079,943	-				+0.3
4,079,943	-				+1.5
4,079,971	+				-0.3
4,080,031	-				+0.4
4,080,174	+				+0.2
4,080,238	+		Pf6N2E2_3500	0.13	-1.8
4,080,239	-		Pf6N2E2_3500	0.13	-1.6
4,080,239	-		Pf6N2E2_3500	0.13	+0.4
4,080,239	-		Pf6N2E2_3500	0.13	+0.1
4,080,240	+		Pf6N2E2_3500	0.13	-0.9
4,080,378	-		Pf6N2E2_3500	0.24	+0.9
4,080,512	-		Pf6N2E2_3500	0.34	-0.5
4,080,512	-		Pf6N2E2_3500	0.34	-0.6
4,080,521	+		Pf6N2E2_3500	0.34	-1.0
4,080,521	+		Pf6N2E2_3500	0.34	-1.0