Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3168

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
3,661,484	-				+0.3
3,661,484	-				-0.2
3,661,484	-				-0.3
3,661,516	+				+1.8
3,661,517	-				+0.2
3,661,668	+		Pf6N2E2_3167	0.21	-1.0
3,661,669	-		Pf6N2E2_3167	0.22	+0.5
3,661,669	-		Pf6N2E2_3167	0.22	-0.5
3,661,679	-		Pf6N2E2_3167	0.23	-1.5
3,661,679	-		Pf6N2E2_3167	0.23	+0.4
3,661,695	-		Pf6N2E2_3167	0.25	-0.1
3,661,783	+		Pf6N2E2_3167	0.36	+1.1
3,661,783	+		Pf6N2E2_3167	0.36	-0.1
3,661,784	-		Pf6N2E2_3167	0.37	+0.0
3,661,784	-		Pf6N2E2_3167	0.37	-0.8
3,661,784	-		Pf6N2E2_3167	0.37	+1.2
3,661,784	-		Pf6N2E2_3167	0.37	+0.3
3,661,792	+		Pf6N2E2_3167	0.38	+0.8
3,661,792	+		Pf6N2E2_3167	0.38	+0.4
3,661,794	+		Pf6N2E2_3167	0.38	-1.8
3,661,794	+		Pf6N2E2_3167	0.38	-0.6
3,661,794	+		Pf6N2E2_3167	0.38	-0.1
3,661,794	+		Pf6N2E2_3167	0.38	-0.6
3,661,794	+		Pf6N2E2_3167	0.38	+0.8
3,661,795	-		Pf6N2E2_3167	0.38	-0.4
3,661,795	-		Pf6N2E2_3167	0.38	+0.7
3,661,903	+		Pf6N2E2_3167	0.52	+0.5
3,661,904	-		Pf6N2E2_3167	0.52	-0.7
3,661,904	-		Pf6N2E2_3167	0.52	-0.2
3,661,904	-		Pf6N2E2_3167	0.52	+0.9
3,661,904	-		Pf6N2E2_3167	0.52	-0.2
3,661,904	-		Pf6N2E2_3167	0.52	+0.1
3,661,904	-		Pf6N2E2_3167	0.52	+0.2
3,661,904	-		Pf6N2E2_3167	0.52	-0.4
3,661,912	+		Pf6N2E2_3167	0.53	-0.2
3,662,188	+		Pf6N2E2_3167	0.89	-0.2
3,662,188	+		Pf6N2E2_3167	0.89	+0.6
3,662,188	+		Pf6N2E2_3167	0.89	+0.2
3,662,188	+		Pf6N2E2_3167	0.89	+1.1
3,662,189	-		Pf6N2E2_3167	0.89	+1.4
3,662,189	-		Pf6N2E2_3167	0.89	+0.2
3,662,189	-		Pf6N2E2_3167	0.89	-0.4
3,662,324	+				+0.9
3,662,324	+				-0.1
3,662,399	+				+0.3
3,662,399	+				-0.9
3,662,399	+				-0.5
3,662,399	+				+1.0
3,662,399	+				-0.4
3,662,399	+				+0.5
3,662,399	+				+1.7
3,662,399	+				+0.7
3,662,399	+				+0.3
3,662,399	+				+1.0
3,662,400	-				+1.4
3,662,400	-				-1.1
3,662,400	-				-0.9
3,662,400	-				-0.4
3,662,400	-				-1.4
3,662,400	-				-0.3
3,662,400	-				+0.5
3,662,400	-				+0.3
3,662,400	-				-0.0
3,662,400	-				+0.2
3,662,400	-				+0.0
3,662,400	-				-1.4
3,662,445	+				-2.2
3,662,445	+				+0.9
3,662,445	+				-0.4
3,662,445	+				+1.3
3,662,445	+				+1.5
3,662,446	-				+0.5
3,662,446	-				+0.5
3,662,446	-				-0.2
3,662,446	-				+0.2
3,662,477	-				+0.2
3,662,477	-				+1.1
3,662,494	+				+0.5
3,662,495	-				-0.9
3,662,648	+		Pf6N2E2_3168	0.12	-1.3
3,662,648	+		Pf6N2E2_3168	0.12	+0.7
3,662,648	+		Pf6N2E2_3168	0.12	-0.5
3,662,648	+		Pf6N2E2_3168	0.12	-0.7
3,662,648	+		Pf6N2E2_3168	0.12	+0.6
3,662,648	+		Pf6N2E2_3168	0.12	-1.4
3,662,649	-		Pf6N2E2_3168	0.12	-1.9
3,662,649	-		Pf6N2E2_3168	0.12	-2.8
3,662,679	+		Pf6N2E2_3168	0.14	-2.4
3,662,679	+		Pf6N2E2_3168	0.14	-0.5
3,662,679	+		Pf6N2E2_3168	0.14	-0.5
3,662,679	+		Pf6N2E2_3168	0.14	-0.1
3,662,680	-		Pf6N2E2_3168	0.14	+0.2
3,662,680	-		Pf6N2E2_3168	0.14	-2.0
3,663,256	-		Pf6N2E2_3168	0.56	-0.7
3,663,503	-		Pf6N2E2_3168	0.74	-3.1
3,663,576	+		Pf6N2E2_3168	0.79	+0.4
3,663,714	-		Pf6N2E2_3168	0.89	-1.4
3,663,817	-				-1.3
3,663,859	-				-0.1
3,663,891	+				+0.5
3,663,892	-				-0.2
3,663,935	+				+0.9
3,663,935	+				+0.7
3,663,935	+				-0.6
3,663,935	+				+0.6
3,663,935	+				+0.6
3,663,936	-				-1.4
3,663,936	-				+1.0
3,663,936	-				+0.9
3,663,936	-				+0.4
3,663,936	-				-0.3
3,664,022	+		Pf6N2E2_3169	0.18	+0.5
3,664,163	+		Pf6N2E2_3169	0.35	-0.2
3,664,164	-		Pf6N2E2_3169	0.36	+0.4
3,664,460	-		Pf6N2E2_3169	0.72	+1.8
3,664,460	-		Pf6N2E2_3169	0.72	+1.6
3,664,463	+		Pf6N2E2_3169	0.72	-0.5
3,664,463	+		Pf6N2E2_3169	0.72	+0.4
3,664,463	+		Pf6N2E2_3169	0.72	+0.1
3,664,463	+		Pf6N2E2_3169	0.72	-0.8
3,664,463	+		Pf6N2E2_3169	0.72	-1.1
3,664,464	-		Pf6N2E2_3169	0.72	-0.5
3,664,464	-		Pf6N2E2_3169	0.72	-0.1
3,664,464	-		Pf6N2E2_3169	0.72	+0.8
3,664,464	-		Pf6N2E2_3169	0.72	+0.2
3,664,464	-		Pf6N2E2_3169	0.72	+0.1
3,664,748	-				-0.5
3,664,776	-				-0.7